Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1349 ATGGATCATATTAGTAATGAGGCTAGTGTTGACCGTTTTCCAATTGGCCCATCAGACATTCTTGGACGCACAATTGCTTTCAGGGTTCTATTCTGCAAGTCCATGTCTCATTTGAGGCATCAGCTGTTTCATGTCTTGTTGGTTCTGTTCTATAGGTCTAGGGGGATTTTGTCATCCTTTTTATCATGGTTTCATCCGAGGAACCCACAGGGGATATTGGCAATGATGACTATAGTTGCTTTCTTGTTGAAACGGTACACGAATGTAAAGGTGAGGGCTGAGATGGCTTATAGGAGGAAATTCTGGAGAAATATGATGAGATCTGCTTTGACCTATGAGGAGTGGGCTCATGGAGCTAAGATGCTTGATAAAGAGACACCAAAGATGAATGAGTCTGACCTTTATGATGTGGAATTGGTGAGGAACAAGCTTCAAGAGCTTCGGCATCGTCGACAAGAGGGATCTCTTAGAGATATTATGTTTTGTATGCGTGCTGATCTTGTTAGAAATCTAGGTAATATGTGTAACCCTGAACTGCACAAGGGTAGGCTTCAAGTCCCCAGGTTAATCAAGGAGTACATTGATGAAGTGTCAACCCAATTGAGGATGGTCTGTGACTCTGATTCACAGGAGCTATTACTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGACATGCATTTGGGAGGACAGCTTTGCTGTTAAGTGGGGGTGCTTCTCTTGGAGCTTCTCATGTAGGCGTGGTTAAAACACTGGTAGAACATAAACTCTTGCCTAGGGTAATTGCTGGTTCAAGTGTGGGATCCATAATGTGTGCTGTTGTTGCTACTAGGTCTTGGCCTGAGCTTCAGAGTTTCTTTGAAGACTCATGGCACTCAATGCAATTTTTCGATCAAATGGGAGGGATTTTCACAGTTGTGAAGAGGGTCGCAACACGTGGTGCTGTTCATGAGATCAGACAGTTGCAAATTATGTTGAGGCATCTGACAAACAACCTTACATTTCAAGAAGCTTATGACATGACAGGTAGAGTTCTTGGGATTACAGTTTGCTCCCCAAGGAAGCATGAACCTCCGAGATGTCTTAATTACTTGACCTCACCCCATGTGGTTATATGGAGTGCAGTCACCGCTTCTTGCGCCTTTCCTGGCCTTTTTGAAGCTCAGGAATTGATGGCAAAGAATAGAAGTGGAGAGATTGTTCCTTACCATCCCCCTTTTAATCTGGGTCCTGAGGAAGGCTCCACACCAGCTCGTCGGTGGAGGGATGGTAGCTTGGAAATTGATTTGCCTATGATGCAGTTGAAAGAGCTATTCAATGTCAATCATTTTATAGTCAGCCAGGCCAATCCTCATATTGCACCATTATTGAGATTGAAAGAATTTATACGAAATTATGGAGGCAATTTCGCTGCCAAGCTTGCTCAACTTGTAGAGATGGAGGTGAAACATCGATGTAATCAGATACTGGAACTTGGCTTTCCTCTAGGTGGACTTGCGAAGCTGTTTGCTCAAGAATGGGAAGGTGATGTGACTGTTGTTATTCCTGCAACCCTTGCTCAGTACACAAAAATTATACAGAACCCTTCATATGGGGAGCTTCAAAAGGCAGCCAACCAAGGGAGAAGATGCACCTGGGAGAAGCTTTCAGCCATAAAAGCAAACTGTGAAATTGAGCTTGCTCTTGATGAATGTGTGACGATTCTCAATCATATGAGAAGACTAAAAAGGAATGCTGAGAGAGCTGCTTCTACTTCTCATGGTTTGTCCAGCACTTACAAATTCAGTGCTTCTAGAAGAATTCCCTCATGGAATTGCATTGCAAGAGAGAATTCCTCAGGCTCCCTTGAAGACCTTACAGAAGCTGTTTCCTCATTGCATCAAGGCATCGGCAGTTCCAATGGAGCCAATGGGAAAACTTGGAAGAGCCCCCGTGGCATGCATGAGGGGGGTGACAGTGACTCTGAAAGTGTTGATCTGACTCCTTGGACCAGATCTGGTGGACCTCTGATGAGAACTGCTTCAGCAAATGTTTTCACTGACTTTCTCCAAAACTTGGAGGCTGATAATGAACTACATAGAGGCTCAGTGGCTCATCTTAACTCTCATGCAAATATGTTCACAGACTCTGAGCAGAGGGAAATTGGCAACAGGGTTGTTACTGGGTCTAGTATTCTGGTAACTGAAGGTGATCTTTTGCAGCCTGAAAGGATCCATAATGGGATTGTGTTTAATGTTGTCAAGAAAGAAGGATTAAGACCTTCAAATAGGAGTCATGATTTTGGAAATTACAGTAATGAAGTTGCTGAATGTGTCCAGATTGACTGTCCAGAGAAGGAGATGGATGCTGCTAGCTCAGCTTCTGAACATGAAGATGATGAATCCACACCAGCTAGGCTCCTCACTGAAACACCAGACTATAATTCCATGGACCATCATGCTGGCTCAGATGATAGTTAG 2460 0.4374 MDHISNEASVDRFPIGPSDILGRTIAFRVLFCKSMSHLRHQLFHVLLVLFYRSRGILSSFLSWFHPRNPQGILAMMTIVAFLLKRYTNVKVRAEMAYRRKFWRNMMRSALTYEEWAHGAKMLDKETPKMNESDLYDVELVRNKLQELRHRRQEGSLRDIMFCMRADLVRNLGNMCNPELHKGRLQVPRLIKEYIDEVSTQLRMVCDSDSQELLLEEKLAFMHETRHAFGRTALLLSGGASLGASHVGVVKTLVEHKLLPRVIAGSSVGSIMCAVVATRSWPELQSFFEDSWHSMQFFDQMGGIFTVVKRVATRGAVHEIRQLQIMLRHLTNNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKNRSGEIVPYHPPFNLGPEEGSTPARRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFIRNYGGNFAAKLAQLVEMEVKHRCNQILELGFPLGGLAKLFAQEWEGDVTVVIPATLAQYTKIIQNPSYGELQKAANQGRRCTWEKLSAIKANCEIELALDECVTILNHMRRLKRNAERAASTSHGLSSTYKFSASRRIPSWNCIARENSSGSLEDLTEAVSSLHQGIGSSNGANGKTWKSPRGMHEGGDSDSESVDLTPWTRSGGPLMRTASANVFTDFLQNLEADNELHRGSVAHLNSHANMFTDSEQREIGNRVVTGSSILVTEGDLLQPERIHNGIVFNVVKKEGLRPSNRSHDFGNYSNEVAECVQIDCPEKEMDAASSASEHEDDESTPARLLTETPDYNSMDHHAGSDDS* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1349 819 MobiDBLite consensus disorder prediction 779 819 - -
Lja1g1349 819 Pfam Patatin-like phospholipase 233 424 IPR002641 GO:0006629
Lja1g1349 819 Pfam Domain of unknown function (DUF3336) 95 226 IPR021771 GO:0004806|GO:0006629
Lja1g1349 819 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Lja1g1349 819 SUPERFAMILY FabD/lysophospholipase-like 229 575 IPR016035 -
Lja1g1349 819 MobiDBLite consensus disorder prediction 779 799 - -
Lja1g1349 819 Gene3D Cytosolic phospholipase A2 catalytic domain 221 309 - -
Lja1g1349 819 MobiDBLite consensus disorder prediction 628 660 - -
Lja1g1349 819 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 711 - -
Lja1g1349 819 Gene3D Cytosolic phospholipase A2 catalytic domain 310 493 - -
Lja1g1349 819 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 711 - -
Lja1g1349 819 CDD Pat_SDP1-like 163 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1349 Lja-Chr1 14213923 14217261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1349 1 785 Acyl Lipid Metabolism Gene Families AT5G04040 74.444 0.0 1216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1349 K14674 - gmx:100791261 1418.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1349 1 14213923 14217261 Lja1g1349 1 14213923 14217261 ECH