Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1345 ATGGGATCCCAAACACAGTCTCAGCTACCAGTTGTTGACTTCACCGATGAAAACATGCAGCTTGGCAGTGATGCGTGGCTCTCAGCCTGCCATGTCGTGAGGACTGCCCTTGAGCACCATGGTTGTTTCGTTGCACGCTTTGATAAACTTGGAAAAGAGCTTTGTGACACTGTTGTCTCCAACTTGGAAGAATTGTTTGGTCTTCCACTTGAAACAAAAGCTCAAAAGACCAGTGACAAGCTTTTCCATAGCTACCTAGGACAAGTGTCATGGCTTCCCTTATATGAATCTCTGGGCATTGACGATCCATTATCCGTGGATGGATGTCAGAAATTCACTAGCATCATGTGGCCGGAAGGGAACAGTCATTTCTGTGAATGGATGAATGAGTATGCTAAGCTCTTGGGAGAGTTAGACCGAATGACCAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATGGAACGATGCGATTGTTTCATAGAATCAAGCAATTATCTTCTTCGATGCTTAAAATACAGAGCACCTCAGATGGATGAAGAAAATGTTGGGTTGCAGTCTCACACAGACTTGACTTTGATATCCGTAGTGCATCAGCTGAACAATCTGAATGGATTGGAAATTAAACTGAAGGATGGGGAGTGGACTGGGGTTGATGCTTCACCCTCTATGTTTGTGGTCATGGCAGGGGATGCACTCAATGTGTGGAGTAATGGCAAGATAAGGCCATGTGAACACAGGGTTATAATGAATGCAAAGCAAACAAGATACTCCACGGGACTATTTTCTTTTTATAGTAAGGTGATGGAGATACCGGAGGAGCTAGTGAATGAGCAACACCCCTTGCGTTATAAACCAACATTTGACCATTATGACTACCTTAGTTTCTTAGACAAAGAGAAAATCAAAGAATTTTATCCCCGAATCCAAGCTTATTGTGGAATCTGA 948 0.4346 MGSQTQSQLPVVDFTDENMQLGSDAWLSACHVVRTALEHHGCFVARFDKLGKELCDTVVSNLEELFGLPLETKAQKTSDKLFHSYLGQVSWLPLYESLGIDDPLSVDGCQKFTSIMWPEGNSHFCEWMNEYAKLLGELDRMTKRMVFESYGVDMERCDCFIESSNYLLRCLKYRAPQMDEENVGLQSHTDLTLISVVHQLNNLNGLEIKLKDGEWTGVDASPSMFVVMAGDALNVWSNGKIRPCEHRVIMNAKQTRYSTGLFSFYSKVMEIPEELVNEQHPLRYKPTFDHYDYLSFLDKEKIKEFYPRIQAYCGI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1345 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 314 - -
Lja1g1345 315 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 314 - -
Lja1g1345 315 Pfam 2OG-Fe(II) oxygenase superfamily 171 262 IPR044861 -
Lja1g1345 315 Gene3D - 1 301 IPR027443 -
Lja1g1345 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 267 IPR005123 -
Lja1g1345 315 SUPERFAMILY Clavaminate synthase-like 6 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1345 Lja-Chr1 14173495 14176159 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1345 118 287 Glycosyltransferase AT5G59530 30.000 1.10e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1345 - - gmx:100775440 520.005