Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1344 ATGCTTCAAACTATTCAGCATCAAACATCCATTTACCACCGAAGAGAAGCAGATAGCAAACTAAAAATGGGATCAGAAGACAAAGTGAAGCTTCCAGTTATTGACTTCCCCTTTCTGGACTTGGAATCTAATGGTTCTCATTGGGAATCAGTAAAATCCCAAGTCCACAGAGCACTTGTGGAGTATGGTTGCTTTGAGGCTGTGTTTGACAAAGTCTCTTTGGACCTTCGGAGAGCCTTATTTGTTGAACTTGAAGAGCTTTTCGACCTTCCTTTAGAAACCAAGCGAGGAGTTGTGTCTGGTAACCCCTACCATGGTTATCTTGAGCCTTGGAACCTCTATGAAAGCATGGGGATTGACGATGTAGATGATTCAGAGAAAGTTGAAAACACAACCAAGATCTTATGGCCTGAAGGAAAGCCCAGTTTTAGTAAAACTCTACAATCTTTCATGGAGCAAGTGTCAAGGTTGGATCAGATTATTAGGAAGATGAGTTTGGAGAGTTTAGGCGTTGAAAAATACTTGGAGGAACATATGAAATCAACACACTACCTTGCAAGGCTTATCAAGTACAGTGCCCCTCAAACAAATGAAGAACAAGTTGGCCTACCAGAACACACTGATAAGAACACATTGACCATATTGTGTCAAAATCAAATTGATGGCTTAGAGCTTCAGACTAAAAGTGGAGAATGGATCAAGTGCAAGCCCTCATCACCATACAGTTTTGTGGCTTTTTCCGGAGACGCTTTCTATGCATGGACCAATGGCAGGGTGCATTCACCCCATCACCGTGTGATGATGACTGGGAATGAGACAAGGTTCTCAGTTGGACTATTCACGGTTCCAAAACCAGGGCACATGATAAAAGCCCCAGAAGAACTCGTGACAGAGGAGCACCCTTTGCTTTTTAAGCCCTATGTCCACAGTGAGTTCATGAGGTTTCTTCAATCTTCTGAGGGTGAAAAACAAGCACTCAAGGTGTATTCTGGAGTTTGA 999 0.4274 MLQTIQHQTSIYHRREADSKLKMGSEDKVKLPVIDFPFLDLESNGSHWESVKSQVHRALVEYGCFEAVFDKVSLDLRRALFVELEELFDLPLETKRGVVSGNPYHGYLEPWNLYESMGIDDVDDSEKVENTTKILWPEGKPSFSKTLQSFMEQVSRLDQIIRKMSLESLGVEKYLEEHMKSTHYLARLIKYSAPQTNEEQVGLPEHTDKNTLTILCQNQIDGLELQTKSGEWIKCKPSSPYSFVAFSGDAFYAWTNGRVHSPHHRVMMTGNETRFSVGLFTVPKPGHMIKAPEELVTEEHPLLFKPYVHSEFMRFLQSSEGEKQALKVYSGV* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1344 332 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 26 331 - -
Lja1g1344 332 SUPERFAMILY Clavaminate synthase-like 26 319 - -
Lja1g1344 332 Pfam non-haem dioxygenase in morphine synthesis N-terminal 31 108 IPR026992 -
Lja1g1344 332 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 182 283 IPR005123 -
Lja1g1344 332 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 26 331 - -
Lja1g1344 332 Gene3D - 2 320 IPR027443 -
Lja1g1344 332 Pfam 2OG-Fe(II) oxygenase superfamily 189 281 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1344 Lja-Chr1 14171238 14173333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1344 11 301 Glycosyltransferase AT5G59530 24.026 8.31e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1344 - - lja:Lj1g3v4204470.1 678.707