Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1343 ATGACTGAGCAGTTTTCACAATTAGTACATACAGATTTTCAAGGATTGGGAAGAATCATGGGTTCACAAACAGAGTCTCAGGTTCCTCTCCCTGTTATTGATTTCAGTGATGAACACCTGAAGCCTGGTACTCACAAATGGGTGTCTACTTGTCAAGCTGTGAGGAGTGCAATGGAGGATCATGGTGGATTTCTAGCACTCTATGATAAAGTTGATCCACTGCTTTATGACTCTGTCTTCTCTGCAATGAAACGACTCTTTGATCTTCCATCAGAAACAAAGGGGCAAAAAACCACTGATAAGCCTATCTTCAGCTATGCTGCTCAATGCCCCAACATTCCTTTGTATGAATCAATAGCCATAGACAACGCAGTGAGTGCTGGAGATTGTCAAAAGTACACTACTATTATGTGGCCACAAGGGAATGATCATTTCAGTGAAAGTGTCAATTCCTATGCAAAGAAAGTGGCAGAGCTGGATTATATTGTGAAGAAGATGGTGTTTGAGAGCTATGGAGTAGATAATCAGAAACATGAGTCTATGCATGCATCAACTGATTATGTGCTCAGATGCTACAAATACAGAACCCCGCTGGTGGGTGAAACCAACATAGGAGTGCTTCCTCACACTGACTCAGGCTTCTTAACAATAATAAATCAGAGGTTGAATGGCTTAGAAATCAAACTTCAGGATGGGAAGTGGTTCCCAGTTGAGGCCTCACCCTCCATGTTTGCAGTTTTGGCTGGTGAAGCACTCACGGTGTGGAGTAATGACAGGATAAGCGCTTGTCTACACCGAGTATTCATGAATGAAAAGGTGGACAGATACTCCTTGGGGCTACTTTCATATGCTGGCAAGTTAATGGAGCCACAAGAAGAGCTAGTTGATGAAGAACATCCTCTTCGTTATAAACCATTTGATCATTATGGATATCTTCGTTTCTATGTCTCTGAAGAAGGTGTAAAAGCTTTCAAAAATGGTACTAGGATCAAGACATATTGTGGCATTTGA 1011 0.4174 MTEQFSQLVHTDFQGLGRIMGSQTESQVPLPVIDFSDEHLKPGTHKWVSTCQAVRSAMEDHGGFLALYDKVDPLLYDSVFSAMKRLFDLPSETKGQKTTDKPIFSYAAQCPNIPLYESIAIDNAVSAGDCQKYTTIMWPQGNDHFSESVNSYAKKVAELDYIVKKMVFESYGVDNQKHESMHASTDYVLRCYKYRTPLVGETNIGVLPHTDSGFLTIINQRLNGLEIKLQDGKWFPVEASPSMFAVLAGEALTVWSNDRISACLHRVFMNEKVDRYSLGLLSYAGKLMEPQEELVDEEHPLRYKPFDHYGYLRFYVSEEGVKAFKNGTRIKTYCGI* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1343 336 Pfam 2OG-Fe(II) oxygenase superfamily 199 278 IPR044861 -
Lja1g1343 336 SUPERFAMILY Clavaminate synthase-like 26 318 - -
Lja1g1343 336 Pfam non-haem dioxygenase in morphine synthesis N-terminal 30 100 IPR026992 -
Lja1g1343 336 Gene3D - 29 333 IPR027443 -
Lja1g1343 336 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 335 - -
Lja1g1343 336 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 184 289 IPR005123 -
Lja1g1343 336 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 23 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1343 Lja-Chr1 14166022 14169014 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1343 26 304 Glycosyltransferase AT5G59530 23.711 5.72e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1343 - - gmx:100817683 498.434