Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1340 ATGAAGATGAGAAGTCACTGTCGGCTCTGGTGGCCAAAACAGCTCTTATCAAATCAAGAATCATCCTCAAGTATTTTACTGGGGTGGTTTATCACTAGCTCACCATCATCCATTGACATTGTTGTAGCCTTTACTTGTAGTGAAGTCTTGCTTTCTAGTTCTTGTCCTGACATTGAGGGGATCGTTTATGAAACGCATGGAAGCATGCCCACGATTCTTCAGGATAAGTCCAAGTTCTCTGTAGTTGGTCTATGTATCACTGACCCCACTGGTAATAGTTTGATGGCTAAAACAAAGGATGACGAAATTTTTTTCTCTGATTATGGCAATTCTCGGGCAGAGGGAAGTACAAATGCATTTGCAAAGAATAACTGTAGGAGTTGCAGTTGCCTCCAATTAGATGGATCATTGAAAAGAAGTAGCCAACCTTTTATTGGGAAAAGTAATTGGGTGCTGCTGATGTTTGATTCTCCTAAAAAGCATGATGCAGGCATACAAGGGCTACCAAAATTGAACCACATTCATTGGAATGGACAAATTTTGTCAGAATATGATGTTCACGTAATAGTTTATGAACCACCCTCTTATGGTGCTCATCATTTTTCACTGTGTCGCTCTAGTTCAAATGACCAAGTGAAAACTTCCATGAAGAATCCTAAGTGGATTGATGAGCTTCATAAACAGCAGAAATTCATTGAATTGGATACAGTTATTCTGGCAATTAACTGCACAACTGCTGCTAAAAAAAGTTTTGAGAGACATGTGGTCCCCAGAAGATCCTCAAGCCAGCTCTCCGTATTCCCCATGTTTTTTGTTATCATAGGGCATCTGGTTTCTAAGTTTATGGCTTCGTTCTCCACTATGTTCTATTTTGTTCTTCAGTTTTTTCAAACACATTTTAATAATGAATCAGAATCATGGATTTATGTGACATCTGCAAACGTATTCAAGAGGACTGCATGGATAAATATCCAAATCCGTTGTTCTCAGATATTATATTGGCCAATCTTTCTTCAGGAGAATGACCTCAGGTCACAATCATGTGTTGAATATGCCGAGAAGGCTGCAATGCATAGGCATTCTATGTGGTCAACGCTGGTTGTTGATATTCTTCTGGGAAATTTGGTTGGATGGTCACTTTTTTATCATTCAGATACCATTTGTTTGTCAGTTTTAAACTTCACCCATGGGTTTGCCACATTTTTGCGCTCCGGGTGTGTTTGGTTAATGGGAAACCCTGCAGGCTTCAAATTGAATGGTGAGCTGGCTGGAGTACTTGGCATGGTTTCATTGAATGCAATCCAAATATGGTCAACACTCTGGATCTTTGTCGGTTTCATCTTCAATTATATTATTCGAGGGCTTTCTATTTTAGGAATTCTTTGTGGATTCACTGTACCTGCGGCTTTGGTAGTGGACATGATTACATTTGCAACCTTACATGTTTCAACTCTTAATTGGTTGATTGCACTTGTATATTCATTACAGATACAAGCATTAGCAGCCTTGTGGCGGCTTTTCAGGGGTCGGAAGTGGAACCCTCTTCGGCAGAGGTTGGATAGCTTTGACTACACTGTGAAGCAACATATTGTTGGATCTCTTTTGTTTACACCACTTTTACTTCTGTTACCAACTACTTCTGTCTTCTATATATTCTTTAGTATCGTTGACACAACCATTAACCTCATCTGCATACTGATTGAAGTCACTATTTCGGTAATTCATGCTACACCTTATATCAAGATATTTCTTCGGTTGGTGAAACCAGGACGATTCCCTTCTGGAATATGGCTTGAAATTTTTGGTTGTGAGAGTAGTAGTACTGTTTCTCCAAATGCTGATTTTACTGACAAAATGACCTCATCCAATGAATCATGTCATTTAAAGGATTTCAATAGAGAAAAATCTAGTTTTCTGGTTTCAGTTCTCCACAGCAACTATTTGAGCATAGGGAAAGTCGTATTGCCTCACTACAGAAATGTATTTCTGGGAGTTTCTAGGTCATCGATCTCGACAGCAGCTTATGGAATTCTCATTGGGCAGAGAATACCATCTACATGCGGAACTCTTCTTCCTTCTCCAATGCCATGGATGTCCCTGCCCTACAAAGAATATTGGTGTCTATGTCATGATTCGCTTATCGCATGCTTCAGATGA 2157 0.3955 MKMRSHCRLWWPKQLLSNQESSSSILLGWFITSSPSSIDIVVAFTCSEVLLSSSCPDIEGIVYETHGSMPTILQDKSKFSVVGLCITDPTGNSLMAKTKDDEIFFSDYGNSRAEGSTNAFAKNNCRSCSCLQLDGSLKRSSQPFIGKSNWVLLMFDSPKKHDAGIQGLPKLNHIHWNGQILSEYDVHVIVYEPPSYGAHHFSLCRSSSNDQVKTSMKNPKWIDELHKQQKFIELDTVILAINCTTAAKKSFERHVVPRRSSSQLSVFPMFFVIIGHLVSKFMASFSTMFYFVLQFFQTHFNNESESWIYVTSANVFKRTAWINIQIRCSQILYWPIFLQENDLRSQSCVEYAEKAAMHRHSMWSTLVVDILLGNLVGWSLFYHSDTICLSVLNFTHGFATFLRSGCVWLMGNPAGFKLNGELAGVLGMVSLNAIQIWSTLWIFVGFIFNYIIRGLSILGILCGFTVPAALVVDMITFATLHVSTLNWLIALVYSLQIQALAALWRLFRGRKWNPLRQRLDSFDYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFSIVDTTINLICILIEVTISVIHATPYIKIFLRLVKPGRFPSGIWLEIFGCESSSTVSPNADFTDKMTSSNESCHLKDFNREKSSFLVSVLHSNYLSIGKVVLPHYRNVFLGVSRSSISTAAYGILIGQRIPSTCGTLLPSPMPWMSLPYKEYWCLCHDSLIACFR* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1340 718 Pfam N-acetylglucosaminyl transferase component (Gpi1) 323 593 IPR007720 GO:0006506|GO:0016021
Lja1g1340 718 PANTHER N-ACETYLGLUCOSAMINYL TRANSFERASE COMPONENT FAMILY PROTEIN / GPI1 FAMILY PROTEIN 3 717 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1340 K03860 - gmx:100805383 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1340 1 14134941 14142200 Lja1g1340 1 14134941 14142200 ECH