Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1328 ATGACCCTCCCCACCAACCACAACTTGTTCTCATTGGTCTTCCTAGTGACCATTCTATGTTCCTCTTTGTTCCTCACCACAACAGCTTCTGAATCTAAAGGTGAAGAATACATCTACACTAAAGGAGCTAGAAATGGACCAGAGAATTGGGGGAGTCTAAAACCTGAGTGGGAAGTTTGTAGAAATGGAAAATCTCAATCTCCAATTGATATTAAAAATGTAGAGGGGTTTTCTCAACTTGGAAAACTTAAAAAAGATTACAAAGTAGCTCCTGCCACCTTGAAGAATAGGGGCCATGACATCATGCTCCAGTGGGACGGAGATGCAGGGAAGCTTAACATAAATGGAACTTACTACAAGTTTGTGCAAAGTCATTGGCACACACCTTCAGAGCACACGTTGAATGGATCAAAGTTTGACATGGAAATGCATGCAGTCCATGAAAACTCTAAAGGAGAGAGAGCTGTTATTGGAATATGGTATACAATTGGCCAGCCAGATCCCTTGCTTTCAAAGCTGCTCGACAACATAAAATTAAGTGGAGACAACAAGGACATAGATTTGGGAATACTTAACCCAGGACTCATCAAGTTTGGAAGCAGAAAGTATTACAGATATGTTGGTTCTCTGACAACACCACCATGCTCTGAAGGTGTTATTTGGACAATAGTGAAGAAGGTTAGGACGGTCTCAAGGGAGCAGTTGAAGGCCTTAAAAGAAGCTGTTCATGATGGATTTGAGATCAATGCAAGGCCAACCCAGGAGCTTAATGGAAGAAAAGTTTGGTTATATACTCCAAATGTGGTGTGA 810 0.4148 MTLPTNHNLFSLVFLVTILCSSLFLTTTASESKGEEYIYTKGARNGPENWGSLKPEWEVCRNGKSQSPIDIKNVEGFSQLGKLKKDYKVAPATLKNRGHDIMLQWDGDAGKLNINGTYYKFVQSHWHTPSEHTLNGSKFDMEMHAVHENSKGERAVIGIWYTIGQPDPLLSKLLDNIKLSGDNKDIDLGILNPGLIKFGSRKYYRYVGSLTTPPCSEGVIWTIVKKVRTVSREQLKALKEAVHDGFEINARPTQELNGRKVWLYTPNVV* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1328 269 PANTHER ALPHA CARBONIC ANHYDRASE 4-RELATED 12 267 - -
Lja1g1328 269 Pfam Eukaryotic-type carbonic anhydrase 45 263 IPR001148 -
Lja1g1328 269 ProSitePatterns Alpha-carbonic anhydrases signature. 130 146 IPR018338 GO:0004089|GO:0008270
Lja1g1328 269 SUPERFAMILY Carbonic anhydrase 42 262 IPR036398 -
Lja1g1328 269 CDD alpha_CA_prokaryotic_like 46 263 IPR041891 -
Lja1g1328 269 SMART Carb_anhydrase_2a 39 265 IPR001148 -
Lja1g1328 269 Gene3D Alpha carbonic anhydrase 34 267 IPR036398 -
Lja1g1328 269 ProSiteProfiles Alpha-carbonic anhydrases profile. 35 265 IPR001148 -
Lja1g1328 269 PANTHER CARBONIC ANHYDRASE 12 267 IPR023561 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1328 Lja-Chr1 13931887 13936285 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1328 K01674 - gmx:100781864 352.058