Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1326 ATGGGAGTAGTTAGTGATAATACATACTCAAATGGATCTGTTCAGAATTGTAATGGTTTAGAGGAGAAGCTTGATGATCTAAGAAAGCTAATTGGTAAAGCTGATGGTGATCCTTTGAGACTTGTGAGTGTTGGAGCTGGTGCTTGGGGAAGTGTTTTTGCAGCTTTGTTACAAGACAATTATGGCCAATTCAGGGACAAGATGCAAATCAGGATATGGAGGAGAGCAGGGAGGGCAGTGGACAGAGCCACTGCAGAGCACCTGTTTGAAGTAATTAACAGCAGAGAGGATGTGTTGAGGAGGCTGATCCGGCGCTGCGCGTATCTGAAATATGTTGAGGCGAGGCTCGGTGATAGGACACTCTTTGCTGATGAGATTTTGAAAGATGGATTCTGCCTGAACATGATTGATACTCCACTTTGTCCACTGAAGGTGGTCACTAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTGGTTAATGGTTTGCCTTCAACTGAGACAAGGGAGATTTTTGAAGAGATTAGTAAGTATTGGAAGGAGAGAATCACAGTGCCTATAATCATCTCTTTATCAAAGGGTATTGAAGCAGCATTGGATCCTGTTCCCCATATTATTACTCCCACCAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAAAACATTCTATATCTGGGAGGTCCAAATATTGCCTCAGAAGTCTACAACAAGGAGTATGCCAATGCTCGAATATGTGGAGCTGAGAAATGGAGGAAACATATCGCAAAGTTTCTACGACAACCGCAATTTATTGTCTGGGACAACAGTGACCTCGTCACTCATGAGGTTATGGGTGGCTTGAAAAATGTCTATGCCATTGGAGCTGGAATGGTAGCAGCCCTTACCAATGAGAGTGCTACCAGCAAATCTGTGTACTTTGCACATTGTACTTCAGAGATGATATTCATCACTCACTTGTTGACTAAAGAGCCTGAGAAACTTGCGGGGCCACTACTCGCTGACACTTATGTGACCTTGTTAAAAGGAAGGAATGCATGGTATGGCCAGATGTTAGCTAAGGGAACACTAAGCCCAGCCATGGGTGACAGCATTAGTGGCAAAGGAATGATTCAGGGTGTGTCTGCAGTGGAGGCATTCTTTGAACTTTTGAGCCAATCAAGCCTGAACGTGTTGCATCCCGACGAAAACAAGCCTGTTGCTCCTGTTGAACTCTGCCCTATCTTGAAGACACTCTACAAAATATTGATATCCAGGGAACAGTCATCACAAGCCATTCTAAAAGCTTTGAGGGATGAAAATCTGAATGATCCTCGCGAACGCATTGAGATTGCACAAAGCCATGCTTTCTACAGGCCTTCCCTTCTTGGACAACCGTGA 1380 0.442 MGVVSDNTYSNGSVQNCNGLEEKLDDLRKLIGKADGDPLRLVSVGAGAWGSVFAALLQDNYGQFRDKMQIRIWRRAGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALDPVPHIITPTKMINQATGVPMENILYLGGPNIASEVYNKEYANARICGAEKWRKHIAKFLRQPQFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLTKEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGTLSPAMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPDENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIEIAQSHAFYRPSLLGQP* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1326 459 Coils Coil 17 37 - -
Lja1g1326 459 Gene3D - 271 431 IPR013328 GO:0016491
Lja1g1326 459 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 43 60 IPR006168 GO:0004367|GO:0006072|GO:0009331
Lja1g1326 459 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 264 288 IPR006168 GO:0004367|GO:0006072|GO:0009331
Lja1g1326 459 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 143 245 IPR011128 GO:0016616|GO:0046168|GO:0051287
Lja1g1326 459 Gene3D - 21 102 - -
Lja1g1326 459 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 271 426 IPR008927 -
Lja1g1326 459 Gene3D - 133 267 - -
Lja1g1326 459 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 4 458 - -
Lja1g1326 459 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 271 425 IPR006109 GO:0004367|GO:0005975
Lja1g1326 459 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 271 IPR036291 -
Lja1g1326 459 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 4 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1326 Lja-Chr1 13909922 13913878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1326 10 459 Acyl Lipid Metabolism Gene Families AT2G41540 87.361 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1326 K00006 - gmx:100781512 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1326 1 13909922 13913878 Lja1g1326 1 13909922 13913878 ECH