Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1324 ATGAGCACCCATGGTTCTTACAACATTAGATCCAAATCAAGCTTTGAAAATGACAACAACAACAAGGGCACAAACAACAAAGGCACAATGAAAGAAAGTGGGGGAGGAAGCACAGGAAAGGCAGTGAAAATGGTGACACAAGGGAGCAAGGAGAGCCTGTTCATATGTTTTCTGGTGACCCTTTGGTACTCATCAAACATTGGTGTGATCCTTCTCAACAAGTACCTTCTCTCCAATTATGGTTTCAAGTTTCCAATCTTCCTCACAATGTGTCACATGTCTGCCTGCGCTGTTCTCAGCTATGTCTCCATCGTTTTCTTCAAGATTGTGCCGCAACAGATGATCAAATCCAGGTCCCAGTTCCTAAAGATTGCAACTTTGAGCGTAGTTTTTTGTGGGTCGGTGGTTGGTGGTAACATCTCCCTCAGGTACCTGGCGGTTTCGTTTAACCAAGCGGTGGGGGCGACCACGCCGTTTTTTACGGCGGTTTTTGCTTATATGGCTACGCTTAAGAGGGAGGCTTGGGTTACCTATGGTGCTCTTGTTCCTGTTGTTGCTGGGGTTGTGATTGCAAGTGGGGGTGAACCAGGCTTTCACTTGTTTGGATTCCTTATGTGCCTTAGTGCAACCGCTGCAAGAGCATTCAAGTCTGTTCTTCAAGGCATTTTACTTTCTTCTGAAGGGGAAAAGTTGAACTCCATGAATTTGCTCCTGTATATGTCTCCAATTGCGGTCCTAGTTTTGTTACCTGCAGCGCTTATCATGGAGCCTACTGTTGTAGATGTCACATTGACGCTTGCAAAAGACCATAAATCCATGTGGATACTTCTTTTGCTGAACTCAGTCACAGCATATGCAGCAAACTTAACCAACTTCTTGGTGACTAAACATACAAGTGCTCTCACACTCCAGGTATTAGGCAATGCAAAGGGTGCTGTAGCTGTTGTTATCTCAATACTCATATTCAGAAACCCAGTCACTTTTGTTGGTATGGCTGGCTACACAGTTACCGTGTTGGGAGTTGCTGCATATGGAGAAACTAAAAGGAGGTTTAGATGA 1059 0.4476 MSTHGSYNIRSKSSFENDNNNKGTNNKGTMKESGGGSTGKAVKMVTQGSKESLFICFLVTLWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACAVLSYVSIVFFKIVPQQMIKSRSQFLKIATLSVVFCGSVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYMATLKREAWVTYGALVPVVAGVVIASGGEPGFHLFGFLMCLSATAARAFKSVLQGILLSSEGEKLNSMNLLLYMSPIAVLVLLPAALIMEPTVVDVTLTLAKDHKSMWILLLLNSVTAYAANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIFRNPVTFVGMAGYTVTVLGVAAYGETKRRFR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1324 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 343 - -
Lja1g1324 352 Pfam Triose-phosphate Transporter family 55 344 IPR004853 -
Lja1g1324 352 MobiDBLite consensus disorder prediction 1 38 - -
Lja1g1324 352 PANTHER SOLUTE CARRIER FAMILY 35 48 351 - -
Lja1g1324 352 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN-RELATED 48 351 - -
Lja1g1324 352 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1324 Lja-Chr1 13881416 13887012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1324 44 352 Organic Solute Cotransporters AT5G04160 81.877 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1324 - - gmx:100797956 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1324 1 13881416 13887012 Lja1g1324 1 13881416 13887012 ECH