Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1317 ATGGCTTCAAGATACCAAAGTTCACCAATGGCTTCTAACTACAACAACAGCCATAGAAAAAGCCTTGGCAATGGCCCCAAAGTGTTTCCCCCAAGCCAAGTGGTAGTGGTGGTGGTTCCTTTTCCAGCACAAGGCCATCTCAACCAGCTCCTCCACCTCTCTCGCCTCATCTCATCACACAACATCCCTGTCCATTTTGTTGGCACACCCACACACAACCATCAAACCATAGCTCGTGCCCAAGGCTTTGACCAAAACTCCATCTCAAACATCCAAATTCATGACTTCAAAGTCCCTCCTTTTGCCTCCCCTGCCCCCAACCCAAATGCAGAATCAAAATTCCCTTCCCATCTCCTCCCTTCCTTTGAAGCCTCCTCCAATCTTCGCGAACCGGTGGCCGCGCTTCTCCGATCCCTCTCATCGGTTTCTCGAAGAGTTGTAGTCATCCATGACTCCCTCATGGCATCTGTGGTACAAGATGTCACCCACATAGCAAACTGTGAGAGCTACACTTTCCACAGTGTCTCTGCTTTCACCATGTTCTTCTACATTTGGGATGCAATGGGAAGACCCCAAATACCAAAAACTCCCCTCATGATCCCAAAAGTCCCTTCTCTTGAAGGATGCTTCACAACCCAATTCCTAGATTTCATCACTTCACAATATGAATTCCACAAATTCAGCAAAGGGGCCATCTACAACACAACAAGAGCAATTGAAAAACCTTACATGGAGCTAATAGAAACCATGATCAATCACAAGAACCACTGGGCTCTAGGGCCATTCAACCCTTTGTGTGTTGACAAAGGACTAATACCCAACAACAAAAAAGGTAGACACTCTTGCATTGATTGGCTTGACAAGCAAGAGAAAGAGTCAGTGATCTATGTCTCTTTTGGAACAACAACAGCTTTCACTGAGACACAAATCAAACACCTGGCGTGCGGGTTGGAAAACAGCAAGCAAAAATTCATCTGGGTATTGCGAGATGCTGATAGAGGCGATTTCTTCAACAACAATGGTGATAGCAACACAAGAGTTGAGGTACTACCAAAAGGGTATGAAGAGAGAATCGAAGGGATGGGTCTAATCGTGAGAGATTGGGCACCCCAATTGGAGATTCTGAACCACCCTTCAACAGGAGGGTTCATGAGTCACTGTGGGTGGAACTCATGCATGGAGAGCATCACAATGGGGGTGCCAATTGCAGCATGGCCTATGCATTCGGATCAACCGAGGAACATGGTTTTGGTGTCGGAAGTGCTGAAGGTTGGTCTTGTTGTGAAGGAATGGGAACAGAGGAATGAGATTGTGGCGGATACGGCGGTGGAGAATGCTGTGAGGAGGTTGATGGCGACGGAGGAAGGTGGTGAAATGAGACAAAGAGCGGTGAATTTGAAACATGCGATTCGGAAATCGAAGGTTGAAGGTGAAGGTGTTTCTCGTGTGGAGTTTGAATCTTTCATTGCGCATGTTACCAGATATAGTTTGGTCCAATCACATGAGACATGA 1512 0.4676 MASRYQSSPMASNYNNSHRKSLGNGPKVFPPSQVVVVVVPFPAQGHLNQLLHLSRLISSHNIPVHFVGTPTHNHQTIARAQGFDQNSISNIQIHDFKVPPFASPAPNPNAESKFPSHLLPSFEASSNLREPVAALLRSLSSVSRRVVVIHDSLMASVVQDVTHIANCESYTFHSVSAFTMFFYIWDAMGRPQIPKTPLMIPKVPSLEGCFTTQFLDFITSQYEFHKFSKGAIYNTTRAIEKPYMELIETMINHKNHWALGPFNPLCVDKGLIPNNKKGRHSCIDWLDKQEKESVIYVSFGTTTAFTETQIKHLACGLENSKQKFIWVLRDADRGDFFNNNGDSNTRVEVLPKGYEERIEGMGLIVRDWAPQLEILNHPSTGGFMSHCGWNSCMESITMGVPIAAWPMHSDQPRNMVLVSEVLKVGLVVKEWEQRNEIVADTAVENAVRRLMATEEGGEMRQRAVNLKHAIRKSKVEGEGVSRVEFESFIAHVTRYSLVQSHET* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1317 503 Gene3D Glycogen Phosphorylase B; 280 475 - -
Lja1g1317 503 PANTHER GLYCOSYLTRANSFERASE 32 494 - -
Lja1g1317 503 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 451 IPR002213 GO:0008194
Lja1g1317 503 MobiDBLite consensus disorder prediction 1 26 - -
Lja1g1317 503 PANTHER GLYCOSYLTRANSFERASE 32 494 - -
Lja1g1317 503 CDD GT1_Gtf-like 43 471 IPR002213 GO:0008194
Lja1g1317 503 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g1317 503 ProSitePatterns UDP-glycosyltransferases signature. 368 411 IPR035595 -
Lja1g1317 503 Gene3D Glycogen Phosphorylase B; 36 477 - -
Lja1g1317 503 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 35 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1317 Lja-Chr1 13812354 13814198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1317 37 481 Glycosyltransferase AT2G36780 29.158 2.72e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1317 K13495 K13492 gmx:100799527 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1317 1 13812354 13814198 Lja1g1317 1 13812354 13814198 ECH