Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1314 ATGGTTCACTACCACCGCTACCATCAACTCAGAAAGTTTGCTGCTATTGATGAAGAGTCACAGCACCATGTGTTGGATTGTTCAAGCTACAAGAGAACAAGGCCAAAGCTGTTGTCATTCTTGCTCCTCATCACCTTTCTCTCATGCTGCTATGTCTTGGCACCTTCTTTCACTTTTTCTCTCTTGTTTTCAGACTCTCCTGGTGCTCAAAGTTATGGGAACTCAGATGGGGTTGATGTAAATGCTTCTGCCTGCTCTTCAGTTCCCACTGGAACTATATGCTGTGATAGGAGTGGTTATCGTTCTGATGTCTGTGTGATGAAAGGTGATGTGAGAACACACTCTGCTTCATCTTCAATCTTCCTCTACAATGTTTCAAGGACTATTGAAGGTAGAGAAGGTGAAGAGGATGAGGTACTCCAACATGAAAAGATAAGGCCCTATACTCGAAAGTGGGAGACGAGTGTCATGGACACCATTGATGAACTAAGCCTCATCTCAAAGAAAGTGAAGTTGGGTAGTGCTCATACTTGTGATGTTCAGCATGATGTTCCAGCAGTGTTCTTCTCCAATGGGGGCTACACCGGCAATGTTTACCATGAATTCAATGATGGAATCATTCCATTGTACATCACCTCGCAGCGTTTCAACAAGAAGGTTGTGTTTGTGATTCTTGAGTATCACGATTGGTGGATGATGAAGTATGGTGACATCCTTTCTCGTCTATCAGATTTTCCAGCAATTGATTTCAGAGGAGATAACAGGACTCACTGCTTCCCGGAAGCCGTTGTTGGCCTCAAAATCCACGACGAGCTAACTGTGGATTCAAAATTGATGGAGGGTAACAAGAGCATTGTTGATTTCAGAAACCTTATGGACAAAGCGTATTGGCCTCGGATTAAGGGTCTCATTCAGGATGAGGAGAGGGAAGCACAAGGTAAATTGAGAGAACAAATATCTTCATCTCCATTATCTGAAACCCCTCTAATTAAGCAAGAAGTGCAAGAAAATCCAAAGAAGAAGCCTAAATTGGTTATTGTCTCTAGAAGTGGATCAAGGGCTATAACTAATGAGAATTTGCTGGTGAAGATGGCTGAGGAAATTGGTTTTTTTGTGGAGGTTTTAAAACCTGCTAAAACAACAGAATTGGCAAAGATTTATAGGGTGCTCAATGGAAGTGATGTGATGATTGGGGTTCATGGAGCTGCTATGACACATTTCATGTTCTTGAAATCTGGTTCTGTGTTCATTCAAGTGGTTCCTCTTGGCACCAATTGGGCTGCAGAAACTTACTATGGTGAGCCTGCAAGGAAGCTTGGTTTGAAGTACATTGGCTATGAGATTCATCCTAGAGAGAGCTCTTTGTATGAGAAATATGATAAAAATGACCCTATTCTAAGAGACCCTGCAAGCATTAACGAGAAGGGGTGGGAATACACTAAGAAGATCTACCTTGACAGCCAAAATGTTAAGTTAGACCTCAGAAGATTCAGAAAAAGGTTGCTTAGATCTTATGAGTACACTGTCTCCAAATCAAATCTGAGGCTTCAACACCAACCACAGTGA 1566 0.4208 MVHYHRYHQLRKFAAIDEESQHHVLDCSSYKRTRPKLLSFLLLITFLSCCYVLAPSFTFSLLFSDSPGAQSYGNSDGVDVNASACSSVPTGTICCDRSGYRSDVCVMKGDVRTHSASSSIFLYNVSRTIEGREGEEDEVLQHEKIRPYTRKWETSVMDTIDELSLISKKVKLGSAHTCDVQHDVPAVFFSNGGYTGNVYHEFNDGIIPLYITSQRFNKKVVFVILEYHDWWMMKYGDILSRLSDFPAIDFRGDNRTHCFPEAVVGLKIHDELTVDSKLMEGNKSIVDFRNLMDKAYWPRIKGLIQDEEREAQGKLREQISSSPLSETPLIKQEVQENPKKKPKLVIVSRSGSRAITNENLLVKMAEEIGFFVEVLKPAKTTELAKIYRVLNGSDVMIGVHGAAMTHFMFLKSGSVFIQVVPLGTNWAAETYYGEPARKLGLKYIGYEIHPRESSLYEKYDKNDPILRDPASINEKGWEYTKKIYLDSQNVKLDLRRFRKRLLRSYEYTVSKSNLRLQHQPQ* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1314 521 Pfam Glycosyltransferase 61 329 416 IPR007657 GO:0016757
Lja1g1314 521 PANTHER GLYCOSYLTRANSFERASE 22 517 IPR007657 GO:0016757
Lja1g1314 521 PANTHER EGF DOMAIN-SPECIFIC O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE-LIKE 22 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1314 Lja-Chr1 13749363 13752030 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1314 - - gmx:100785080 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1314 1 13749363 13752030 Lja1g1314 1 13749363 13752030 ECH