Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1298 ATGATGGCGTGCAATGGCAGTGGCGGGTGCCAATCCGGTTGCTACAAAGACGAAGAAGAGACACGCAACGAACCAACAGAGTCTGCAGAAACCGATTCGAGAAGCTCTGGTAGTATCTGCATCAAGTGCAAGCTAAACGACGCCGTTTCCGGCTACGGCGGCATCGACGATGGTCGTTTCTGCGCTGATTGCTTCAGGAGCAACTTGTTCGGGAAGTTTCGCCTCGCCGTCACATCCAACGCCATGATTTCACCCACTGATAAGGTCCTCGTTGCCTTCTCTGGTGGCCCTTCTTCCAGGGTAGCTTTGCAGTTTGTGCATGACATGCAAGAGAGGGCCCAAAAGAACTTTGATGCTAGTAGAGATAGGTCGCTGCCGGTGTTTGGTGTTGGAGTGGTGTTTATTGATGAGAGTGTTGTTATGCCGATTCCTTCTCATGAAATGGAGGAGGCTGTTGAAGTTATTAGTTCGGTTGTGTCGAGTTTAGCCCCGCCGAGGAAGGATTTACATCTTGTTCCTATTGAGATGGTTTACTCCTCGGATTCTAGTGATGGAAAGGAGAGAATGATGAAGCTTGTGAACTCGGTGAGTGATCCTACTGGAAGGGAGGATCTGTTGCTTCATCTGCGTATGTTGGCCCTGCAAAAGGTTGCTTCTGAATATGGGTATAACAGAATTGTTCTAGGATCATGCATTTCCAGGATCGCTGCCCATGTCATTTCAGCCACAGTGAAGGGTCAAGGATATTCATTATCTGCAGATATACAGTATGTTGATGCTAGATGGGAGATTCCTATTGTGCTTCCTCTGCGTGATTGTTTTGTCCAAGAGATCAACATGCTTTGCCGGCTTAACGGTCTAAAGGCTTTGAAATTGTCTTCAGGTCCAAGCTCTAGCATTAATGGCTTGGTCTCATCTTTTGTGGCATTATTGCAGGAAGAAAACCCATCTCGAGAGAGCACAATTGTAAGAACAGCTGGGAAACTTATTCCCTTCCAATTCAACAGGATTCCTGAGATCATTGATGGTAATGTTCCCTTGGCAACTCGAAGACGCCAGAAAAGATATAATCTCAAATCCAATGAATCTGTTTCCTCGGAATCTTTCTGTCCTCTTTGCAACAGCCCACTTGACAAGAGTGAGATTGTTGATTGGAGCAATCTCGATGATCGCAGAAGTAGTGACATTTTTTACACTACCTGCTGTTCAAGTTGTCAGTTTCAGATACTTCCACAAGATTCCAAGTCAGTTGAGCAATTTTATATGGATTTACCCCAATCAGTGGTTGCCCGTGCAAAGCAACCCAACAATAGTAATTTGAACGTTCTTAGGGAACAAATACAAGATTGCTTGCTTTCAGATGGTGAAGATGAAACTTAG 1380 0.4536 MMACNGSGGCQSGCYKDEEETRNEPTESAETDSRSSGSICIKCKLNDAVSGYGGIDDGRFCADCFRSNLFGKFRLAVTSNAMISPTDKVLVAFSGGPSSRVALQFVHDMQERAQKNFDASRDRSLPVFGVGVVFIDESVVMPIPSHEMEEAVEVISSVVSSLAPPRKDLHLVPIEMVYSSDSSDGKERMMKLVNSVSDPTGREDLLLHLRMLALQKVASEYGYNRIVLGSCISRIAAHVISATVKGQGYSLSADIQYVDARWEIPIVLPLRDCFVQEINMLCRLNGLKALKLSSGPSSSINGLVSSFVALLQEENPSRESTIVRTAGKLIPFQFNRIPEIIDGNVPLATRRRQKRYNLKSNESVSSESFCPLCNSPLDKSEIVDWSNLDDRRSSDIFYTTCCSSCQFQILPQDSKSVEQFYMDLPQSVVARAKQPNNSNLNVLREQIQDCLLSDGEDET* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1298 459 Gene3D HUPs 39 397 IPR014729 -
Lja1g1298 459 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 26 453 IPR019407 GO:0000049|GO:0002098|GO:0034227
Lja1g1298 459 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 63 288 - -
Lja1g1298 459 MobiDBLite consensus disorder prediction 15 34 - -
Lja1g1298 459 MobiDBLite consensus disorder prediction 15 29 - -
Lja1g1298 459 Hamap Cytoplasmic tRNA 2-thiolation protein 2 [CTU2]. 34 413 IPR019407 GO:0000049|GO:0002098|GO:0034227
Lja1g1298 459 Pfam Cytoplasmic tRNA 2-thiolation protein 2 299 383 IPR019407 GO:0000049|GO:0002098|GO:0034227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1298 K14169 - gmx:100804325 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1298 1 13539215 13543173 Lja1g1298 1 13539215 13543173 ECH