Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1297 ATGGCTTCTTTAGTATCTTCACCATTTACTCTACCAAGTTCAAAACTTGACCAGCTTTCTTCACTCACCCAAAAGCATCTTTTCCTTCACTCCTTTCTCCCAAAGAAGGGCATTCACCATAACAGCACAAAATCCTCTCTCAGAGTGAAATGTGCTGCAATTGGCAATGGTCTCTTCACCCAAACCACACAAGAAGTTCGTAGAATCATCCCAGAGAATGATCAAAACCTGCCAACAGTGAAAATTGTGTATGTGGTCCTTGAAGCTCAGTACCAATCATCTCTCACTGCTGCAGTTCAAGCTCTCAACAGCAAGAGGAAAAATGCTTCCTATGAGCTTGTGGGGTACTTGGTTGAAGAGCTTCGTGATGTGACAAACTACAAATCCTTCTGCAAGGACTTGGAAGATGCCAATGTCTTCATAGGGTCTTTGATTTTTGTGGAGGAGCTTGCCCTAAAGGTGAAAGCTGCAGTGGAGAAAGAAAGGGACAGGCTTGATGCAGTTCTGGTGTTTCCTTCAATGCCTGAAGTGATGAGGCTTAACAAGTTGGGATCCTTCAGCATGTCACAACTTGGCCAATCAAAAAGCCCATTTTTTCAGCTTTTCAAGAGAAAGAAGCCTAATTCTGCAGGGTTTGCTGATAGTATGTTGAAGCTTGTGAGGACATTGCCTAAGGTTTTGAAGTATTTGCCTAGTGATAAGGCACAGGATGCTAGGCTTTACATATTGAGTCTGCAGTTTTGGCTTGGAGGGTCACCTGATAACTTGCAGAATTTTTTGAAGATGATTTCTGGGTCTTATGTTCCAGCACTGAAAGGGACAAAGATTGAGTATGCTGAGCCAGTTTTGTATTTGGACAGTGGAATTTGGCACCCTCTTGCTCCTTGTATGTATGATGATGTGAAGGAGTATTTGAATTGGTATGGAACTAGAAGGGATGCTAATGAGAAGCTGAAGAGTCCAGATGCTCCTGTGATTGGTTTGATTCTTCAGAGGAGTCATATTGTGACTGGTGATGATGGACACTATGTGGCTGTGATCATGGAACTGGAGGCTAGAGGGGCTAAGGTTGTTCCACTTTTTGCTGGTGGCCTTGACTTCTCAGGGCCTGTGGAGAAGTTTCTGATTGATCCTATCACGAAGAAACCGTTTGTGAATTCAGTGGTGTCCCTTACTGGGTTTGCTCTTGTTGGAGGCCCTGCAAGGCAGGACCATCCGAGGGCGATTGAGGCTTTGATGAAGCTTGATGTTCCTTACATTGTTGCTGTGCCACTGGTATTTCAGACAACTGAGGAATGGCTCAACAGTACTCTTGGTCTGCATCCAATTCAGGTTGCTCTCCAAGTTGCTCTGCCGGAGCTAGATGGAGGCATGGAGCCAATTGTTTTCGCCGGTCGGGATCCCAAAACAGGAAAATCTCATGCTCTTCATAAGAGAGTGGAACAGCTCTGCATCAGGGCAATCAGATGGGCTGAATTGAAAAGAAAATCAAAGGCAGAGAAGAAACTTGCAATCACTGTCTTCAGTTTCCCTCCAGACAAAGGAAATGTTGGAACTGCTGCCTACCTCAATGTCTTCTCCTCCATATACTCAGTTCTGACAGACCTGAAAAGAGATGGTTACAACGTTGATGGCCTTCCAGAGAGTTCAGAAGCTTTGATTGAAGAAGTGATACATGACAAAGAAGCTCAATTCAGCAGCCCAAACCTGAACATTGCTTACAAAATGAATGTCCGCGAGTACCAACGCCTGACTCCCTACTCCACAGCATTGGAAGAGAACTGGGGAAAACCACCAGGAAATCTGAATGCAGATGGAGAGAACCTATTGGTGTATGGGAAACAGTATGGTAATGTCTTCATAGGTGTTCAACCCACATTCGGCTATGAAGGGGATCCAATGAGGCTGCTTTTCTCCAAATCTGCCAGCCCTCATCATGGATTCGCAGCATATTACTCTTTTGTTGAGAAAATCTTCAAAGCTGATGCTGTTCTTCATTTTGGCACACATGGTTCTCTTGAATTCATGCCTGGAAAGCAGGTGGGGATGAGTGATGTTTGTTATCCAGATAGTCTGATCGGGAATATTCCAAATGTTTATTACTACGCGGCAAACAACCCTTCTGAGGCCACAATAGCCAAACGCCGGAGCTATGCAAACACCATTAGCTATCTGACTCCTCCTGCAGAGAATGCTGGTCTATACAAAGGTCTTAAGCAGTTGAGTGAGCTCATCTCCTCATACCAGTCTCTCAAAGATACCGGTCGTGGGCCACAAATTGTGAGTTCAATTATCAGCACTGCAAAACAATGTAATCTTGACAAGGATGTGGCACTACCTGATGAGGGTGAGGAGCTTCCGGCTAAAGAGCGCGACAATGTGGTTGGTAAGGTGTATTCCAAGATCATGGAGATCGAGTCTCGCTTGTTGCCTTGCGGCCTTCATGTCATTGGTGAACCTCCCTCAGCCTTGGAAGCAGTTGCAACACTGGTGAACATTGCTGCACTTGATCGTCCGGAACAAAATATTTCTGCTCTCCCATCGATTCTAGCTGAGACTGTTGGAAGGGAAATAGAAGATGTTTATAGAGGGAGTGACAAAGGAATATTAAAGGATGTAGAGCTTCTTCGGCAAATAACCGAAGCATCGCGTGGAGCAATCACTGCGTTTGTGGAGCGCACTACTAATAAGAAGGGTCAAGTTGTTGTATCTGATAAACTTAGCTCAATCCTTGGATTTGGCATAAATGAGCCATGGATTCAGTACTTGTCAAACACCAAATTTTACCGAGCTGACAGGGAAAAACTTAGAACAATGTTTGAGTTCTTGGGAGAGTGTTTGATGCTGGTTGTGGCTGATAATGAATTGGGAAGTTTAAAACAAGCCTTGGAGGGTAACTTTGTGGAGCCAGGGCCTGGTGGTGACCCTATTAGAAATCCTAAAGTTTTGCCAACAGGAAAGAATATTCATGCCCTGGACCCACAATCTATTCCTACTACTGCAGCATTGCAGAGTGCCAAAGTAGTGGTAGATAGGTTGGTTGAGAGGCAGAAAGCTGATAATGGGGGAAAATATCCCGAGACAGTTGCACTTGTATTGTGGGGAACAGATAATATTAAAACATATGGTGAATCCCTGGCTCAGGTCTTGTGGATGATAGGTGTGAAACCAGTGGCTGATACCTTTGGTAGGGTAAACCGTGTTGAACCTGTAAGCCTTGAAGAGCTTGGAAGGCCTAGGATTGATGTTGTTGTTAATTGCTCAGGAGTGTTCAGAGACCTTTTCATCAATCAGATGAATCTTCTGGATAGAGCAGTGAAGATGGTTGCTGAATTAGATGAGCCACTAGAGCAAAACTATGTAAGAAAGCATGCATTGGAACAAGCTGAAGCCCTTGGAATTGAAGTTCGAGAAGCGGCAACAAGGATCTTCTCCAATGCCTCTGGATCCTACTCCTCTAACATAAACCTGGCTGTGGAGAATTCCTCATGGAATGATGAGAAGCAGCTCCAGGACATGTATCTCAGCAGAAAGTCTTTTGCTTTTGATTGTGATGCTCCCGGCGCAGGCATGGCCGAAAAAAGGAAAGTATTTGAGATGGCTCTGAGCACAGCAGAGGCAACATTCCAAAACCTTGACTCGTCAGAAATCTCCCTCACTGATGTCAGTCATTACTTTGATTCAGACCCAACCAATCTTGTTCAAAATCTAAGGAAAGATGGGAAGAAGCCTAGTGCATACATTGCTGACACAACCACAGCCAATGCCCAGGTACGTACTCTTGCTGAGACAGTTAGACTTGATGCAAGAACCAAGCTGTTGAACCCAAAGTGGTATGAAGGCATGTTGTCAAGTGGATATGAGGGTGTTCGTGAGATTGAGAAGAGACTGACAAATACAGTAGGGTGGAGTGCAACTTCAGGCCAGGTTGACAACTGGGTGTATGAAGAAGCCAACACAACTTTCATTGAAGATGAGCAAATGCTGAACAAGCTCATGAACACTAATCCTAACTCATTTAGGAAGCTGGTGCAGACATTCTTGGAAGCCAATGGGCGCGGTTACTGGGAAACCTCTAAACAGAATATTGAGAGGCTCAAGCAGTTGTACTCAGAAGTGGAAGACAAAATTGAAGGCATTGATCGTTGA 4149 0.4466 MASLVSSPFTLPSSKLDQLSSLTQKHLFLHSFLPKKGIHHNSTKSSLRVKCAAIGNGLFTQTTQEVRRIIPENDQNLPTVKIVYVVLEAQYQSSLTAAVQALNSKRKNASYELVGYLVEELRDVTNYKSFCKDLEDANVFIGSLIFVEELALKVKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKPNSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALKGTKIEYAEPVLYLDSGIWHPLAPCMYDDVKEYLNWYGTRRDANEKLKSPDAPVIGLILQRSHIVTGDDGHYVAVIMELEARGAKVVPLFAGGLDFSGPVEKFLIDPITKKPFVNSVVSLTGFALVGGPARQDHPRAIEALMKLDVPYIVAVPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPKTGKSHALHKRVEQLCIRAIRWAELKRKSKAEKKLAITVFSFPPDKGNVGTAAYLNVFSSIYSVLTDLKRDGYNVDGLPESSEALIEEVIHDKEAQFSSPNLNIAYKMNVREYQRLTPYSTALEENWGKPPGNLNADGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVALPDEGEELPAKERDNVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEQNISALPSILAETVGREIEDVYRGSDKGILKDVELLRQITEASRGAITAFVERTTNKKGQVVVSDKLSSILGFGINEPWIQYLSNTKFYRADREKLRTMFEFLGECLMLVVADNELGSLKQALEGNFVEPGPGGDPIRNPKVLPTGKNIHALDPQSIPTTAALQSAKVVVDRLVERQKADNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVKPVADTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPLEQNYVRKHALEQAEALGIEVREAATRIFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMAEKRKVFEMALSTAEATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRTLAETVRLDARTKLLNPKWYEGMLSSGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIEDEQMLNKLMNTNPNSFRKLVQTFLEANGRGYWETSKQNIERLKQLYSEVEDKIEGIDR* 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1297 1382 CDD CobN_like 156 1253 IPR003672 GO:0009058
Lja1g1297 1382 Pfam CobN/Magnesium Chelatase 246 1362 IPR003672 GO:0009058
Lja1g1297 1382 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 83 1381 IPR003672 GO:0009058
Lja1g1297 1382 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 83 1381 - -
Lja1g1297 1382 Coils Coil 1356 1382 - -
Lja1g1297 1382 TIGRFAM BchH: magnesium chelatase, H subunit 81 1380 IPR011771 GO:0015995|GO:0016851
Lja1g1297 1382 Pfam Domain of unknown function (DUF3479) 81 242 IPR022571 GO:0016851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1297 K03403 - gmx:100787735 2595.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1297 1 13531006 13537416 Lja1g1297 1 13531006 13537416 ECH