Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1290 ATGAGTATGGTTTCCGGAGTCATTTCCCGGCAAGTTCTGCCTGCTTGTGGCAGTCTTTGTTTCTTCTGCCCTGCCATGAGAGCCAGGTCCAGACAACCTGTCAAGAGGTACAAGAAGCTCATTGCTGAGATTTTCCCTCGTAATCAGGAGGAAGGGGCAAATGATAGGAAAATAGGAAAACTATGTGATTATGCTGCCAAAAATCCTTTACGCATCCCAAAGATTGTGAATGCCCTCGAGCAAAGGTGTTACAAGGAGCTACGAAGCGAGAATTTACATTCAACAAAAATAGTCATGTGTATTTACAAGAAATTTCTGTTTTCTTGTAAAGAACAAATGCCACTATTTGCAAGTAGCTTGCTAAGTATTATCCACACGCTGCTGGATCAAACACGGCAGGATGAAATGAGAAATATAGGATGCCATATTCTTTTTGATTTTGTAAATAATCAGCTTGATGGAAGTTACCTGTTCAGCTTAGAAAGTATTATCCCGAAGCTCTGTCAGTTAGCTCAAGAAACTGGGGAAGATGAAAGGGCAAGAGCTACTCGTTCAGCTGGTTTGAAAGCCCTTTCGTCAATGGTTCGGTTTATGGGCGAACACTCTCATATATCAGTTGAGTTTGATAATATTGTTACATCTGTCCTGGAGAACTACGAAGTTCCTAAAGATAATTCAGCAAGCATTGGTCATGAGAATCAAGGTCCTGAGAAGAAGTGGGTCCAAGACGTCTCCAATGAGGGTCAAATCTCTCCTTTGATGGATGTCAAAATGAGAAACCCGTCCTGGAGTAAGATTGTTAATGACAAAGGCGACATAAATATAACAATGGAAGATGACAAAAATCCCTCTTTTTGGTCCGGGGTTTGCCTACACAACATGGCCAACTTAGCCAAGGAAGGGACTACTATACGTCGTGTAATGGAATCTGTATTTCGATACTTTGATAATAGAAATTTATGGTCTATAAACCATGGCCTTGCTTTTTCTGCTTTGAAGGATATACTATTTTTGATGGATGACTCTGAGAAAAACACACATGTTTTGCTGTCAATGTTAATTAAGCATCTGGATCATAAAATTGTCCTTAAAGAACCCAACATGCAGATAGACATTATTGAGGTGACCACTTCACTTGCCCAGTATGCGAAGGTCCAACCTTCTGTATCAATAATTGGTGCAATAAGTGACATGATGAGACATTTGCGGAAAAGCATACACTGTTGCCTAGATGACTCAAATCTGGCCACTGATGTAATCAATTGGAACAAGAAATTCAGAGAAGTTGTGGACAAATGTCTTGTACAGTTAGCAAACAAGGTTGGAGAAGCAGACCCAATTCTTGATGTTATGGCTGTGATGTTAGAGAATATCTCAACTATTATGATGACATCCAGAACCACAGTCTATGCTGTCTATCAGACTGCTCAAATTGTAGCCTCCTTACCAAATTTGTCCTATCAGAATAAGGCATTCCCTGAGGCATTGTTTCATCAACTACTCCTGGCTATGATCCATCCAGATCATGAAACACGAGTGGTAGCTCACCGCATCTTTTCTGTGATTGTTGTGCCAACCTCTGGTTTCCCTCGTCCGTGCTTGTCTGTTTCTGACACCAAGGCATTGGATGTGCCCCGAACTCTTTCTAGAGCAGTGTCTGTTTTCCATTCTTCAGCTTCCTTATTTGAGAAGCTAAGACAGGAGAAACGTTCTTCAAGTGAAAGATTAAGTCAACATAACAAAGAAAGTATTGCTGGAGGGGCCCTTTCTAGTATGAATAGCCCTCCTCCATTAACTAAAGGGGACAAAATTACTGCAGACAATGATAATCAGAACTTGGAGGCTACTTCCCTCAGGCTGAGTAGGCATCAGATAAATCGATTTCTATCATCAATTTGGGCACAGTCTACCTCTCCTGAAAATATGCCTGCAAATTATGAAGCGATTGCTCATACTTACACCTTGGTGTTGCTTGTTTCTAGAGCCAAGAATTCTTTTCATGAGGTACTAATTCGGAGTTTTCAACTTGCATTTTCTTTATGGAATATGTCTCTTAAAGAAGGGCCATTGCCACCATCTCGTCGGAGATCACTTTTTACTTTGGCAATTTCGATGATAATGTTTTCTTCAATAGCATACAACATTGCCCCTCTTGTGCGTAGTACCAAGGCAGTGCTTACAGAGAGAAAGGTTGACCCCTTCCTTCAATTGATTGAAGATTACAAGTTGCAAGCTGTCAACTGTGAACCAGATGATCTGACCATCAACTATGGATCCAAAGAAGATGATCATAGGGCCTTAGATACACTTTCAGAGTTATCAACTTCTATACACCAGACACAAGAACGCTTTGCTTCTGAAATCATCAAGAGCTGGAAATCCTTTTCAAACGCTGAAGCAACCTCAATAAGGGAGCAACTGCTGCAAGAATTCTCACCAGATGATACATATGAACTTAGATCTCAATTGAACATGATTGTGCCTGAAAAGGATGCTTCAGTAGTTTCAATTGATGATTTTATTCCCGAGTTGTCTGAGAGCCAATCAAAAAAGAATCCGAGATTGTCCATGGAGGTCCCTAGTTTTTTGAGTGCTGATCAACTTTTAGAATTAACTTTTGACACATCTCATCCTGTTGGGAGGATTTCTGTGTCAACTGCATTCAATATGCCTTACGAGGATATGGCTGATAACTGTGAGGTGCTTTTGATGGGAAAGCAGAAGATGTCCAGATTGATGAGTGCCCAACAGAAGCAAGAATGTTTAGTAAACAACCCTTTACCAAATCACGACAACGAATTGAAAAATATGGATTCGTCTTCCCATATGGATATTCAGAAGGCTGCAAATCCTCTCTTTGATGAGAATACTGTTGTTGATTTGTACAAACCAACTTCTGGTCCTGTTCCAATGCTGTGTGCAACTGAATATCAGAACCATCCTAACCTTTTCAAACTGCCAGCATCAAGTCCCATCGATAACTTTCTCAAAGCTGCTGGTTGTTGA 3006 0.4065 MSMVSGVISRQVLPACGSLCFFCPAMRARSRQPVKRYKKLIAEIFPRNQEEGANDRKIGKLCDYAAKNPLRIPKIVNALEQRCYKELRSENLHSTKIVMCIYKKFLFSCKEQMPLFASSLLSIIHTLLDQTRQDEMRNIGCHILFDFVNNQLDGSYLFSLESIIPKLCQLAQETGEDERARATRSAGLKALSSMVRFMGEHSHISVEFDNIVTSVLENYEVPKDNSASIGHENQGPEKKWVQDVSNEGQISPLMDVKMRNPSWSKIVNDKGDINITMEDDKNPSFWSGVCLHNMANLAKEGTTIRRVMESVFRYFDNRNLWSINHGLAFSALKDILFLMDDSEKNTHVLLSMLIKHLDHKIVLKEPNMQIDIIEVTTSLAQYAKVQPSVSIIGAISDMMRHLRKSIHCCLDDSNLATDVINWNKKFREVVDKCLVQLANKVGEADPILDVMAVMLENISTIMMTSRTTVYAVYQTAQIVASLPNLSYQNKAFPEALFHQLLLAMIHPDHETRVVAHRIFSVIVVPTSGFPRPCLSVSDTKALDVPRTLSRAVSVFHSSASLFEKLRQEKRSSSERLSQHNKESIAGGALSSMNSPPPLTKGDKITADNDNQNLEATSLRLSRHQINRFLSSIWAQSTSPENMPANYEAIAHTYTLVLLVSRAKNSFHEVLIRSFQLAFSLWNMSLKEGPLPPSRRRSLFTLAISMIMFSSIAYNIAPLVRSTKAVLTERKVDPFLQLIEDYKLQAVNCEPDDLTINYGSKEDDHRALDTLSELSTSIHQTQERFASEIIKSWKSFSNAEATSIREQLLQEFSPDDTYELRSQLNMIVPEKDASVVSIDDFIPELSESQSKKNPRLSMEVPSFLSADQLLELTFDTSHPVGRISVSTAFNMPYEDMADNCEVLLMGKQKMSRLMSAQQKQECLVNNPLPNHDNELKNMDSSSHMDIQKAANPLFDENTVVDLYKPTSGPVPMLCATEYQNHPNLFKLPASSPIDNFLKAAGC* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1290 1001 MobiDBLite consensus disorder prediction 569 608 - -
Lja1g1290 1001 PANTHER CYCLIN-LIKE PROTEIN 3 1001 - -
Lja1g1290 1001 SUPERFAMILY ARM repeat 59 523 IPR016024 -
Lja1g1290 1001 Coils Coil 562 582 - -
Lja1g1290 1001 MobiDBLite consensus disorder prediction 578 608 - -
Lja1g1290 1001 PANTHER PUTATIVE, EXPRESSED-RELATED 3 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1290 Lja-Chr1 13395489 13415131 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1290 K21842 - gmx:100817296 1509.58