Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1273 ATGGAGGAGAAAGCATCACCTCATTCTTCACAGCAATTCATATCCATTACAGCCCCTCTTCTTGACTCAGAGAAGGATGCAGATAAAGATCAATACAACGTTAATGACTCTCCAATTGAGCAAGTGAGGCTAACAGTTCCAATCACAGATGACCCTACACAGCCAGCTCTAACATTTAGGACATGGATTCTAGGGTTAGCATCATGTGTGCTCCTTGCATTTGTAAACCAATTTTTGGACTACAGAACCAACCCTCTGAAAATATCTTCTGTTGCAGCTCAGATTATTACACTCCCACTTGGGAAATTGATGGCTGCAACACTTCCCACAAGATCAATTCAAGTCCCATTCACAACCTGGTCTTTTTCACTGAATCCAGGGCCATTCTCTTTGAAGGAACATGTTCTGATCACCATATTTGCTAGCTCTGGATCAAGTGGTGTTTATGCAATCAACATCATCACAATTGTGAAGGCTTTCTATCATAGAAGCATCCACCCTGTAGCTGCTTATTTGTTAGCACTATCAACACAGATGCTTGGGTATGGATGGGCTGGGATTTTCAGAAAATTCCTTGTTGACTCCCCTTACATGTGGTGGCCTGAAAACCTTGTGCAGGTGTCACTCTTCAGGGCATTTCATGAAAAAGAAAAAAGGCCTAAAGGAGGAAGCACAAGGCTGCAATACTTTTTCCTAGTCTTCGTAGCGAGCTTCGCGTATTATATCGTTCCCGGGTACTTTTTCCAAACATTATCAACCATCTCCTTTGTTTGCTTGATTTGGAAAGACTCCATCACCGCACAACAGATCGGTTCAGGCATGAAAGGCCTTGGAATCGGCTCATTTGCCCTTGATTGGAACACTGTGGCTGGCTTCTTAGGAAGCCCTTTGGCTGTGCCTGGCTTTGCCATCATGAACTCATTAGCTGGGTTTGTTCTGTTTATATATGTTGTGATTCCACTCTCCTATTGGACCAATTTATATGATGCTAAGAAGTTCCCCCTTATTAGTTCTCACACATTTGACTCCACTGGTGAAACATATAACGTTACTCGGATTCTAAACCCCAAATCTTTTGACATTGATATGGACAGTTACAACAATTATAGCAAGATCTATCTTAGTATCACATTTGCATTTGGTTATGGACTGAGTTTTGCAACTCTGACTGCCACGATTTCACATGTTGCCCTCTTCCATGGAAAAATGATTTTCCAGATGTGGAAGAAGACAGCAAGTGCGGTAAAAGCGCAGCTCGGAGACGTGCATACAAGAATCATGAAGAAAAACTATGAACAGGTCCCTGAATGGTGGTTTGTCTCCATTTTGATTCTGATGGTCATGATGGCCTTGGTAGCTTGTGAAGGCTTTGGCAAGCAGCTCCAACTTCCATGGTGGGGAGTCTTGCTTTCTCTAGCAATTGCATCAGTTTTCACCTTGCCAATTGGGGTCATTCAAGCAACAACAAACATGAGCTCAGGTCTTAATGTGATCACAGAGCTGGTAATTGGTTATATGTACCCAGGAAAGCCTCTTGCTAATGTAGCTTTCAAGACTTATGGCCATATCAGCATGGTCCAAGCACTTGCCTTTCTTGGTGATTTCAAATTAGGACACTATATGAAAATTGCTCCAAAATCCATGTTCGTTGTGCAGCTAGTAGGCACAGTGATTGCTTCTTCTGTTCACTTTGCCACAGCATGGTGGCTTCTCACATCCATTGAGAACATTTGTGATGAAGCATTGTTGCCAAAGGGTAGTCCTTGGACCTGCCCTGGTGATGATGTGTTTTACAATGCTTCCATCATATGGGGAGTGGTAGGGCCAAAGAGAATGTTCACCAAGGATGGTATCTACCCTGGGATGAACTGGTTTTTCCTATTTGGTCTACTTGCACCTGTTCCAGTGTGGCTTCTCTCTAGAAGGTTTCCCAACCAAAAGTGGATTAAGCTCATTAACATTCCTATTATCACTGCAGGTGCATCCAGCATCCCACCAGCGAGGTCTGTGAATTACATCATGTGGGGCATTGTTGGAATCTTCTTCAATTTCTATGTTTATAGAAAGTTCAAGGCATGGTGGGCTAGGCACACTTACATACTCTCAGCTGCTTTGGATGCTGGAGTTGCTTTTATGGGTTTGATCCTTTATTTTGCACTTCAATCTAATGGTATTTTTGGTCCAGAATGGTGGGGTCTTGATGCAGATCACTGCCCTTTAGCTAGATGCCCCACAGATTCAGGTGTATATGCCCAAGGATGCCCTGCTCTGGAACTTCCCTCTTAG 2286 0.4331 MEEKASPHSSQQFISITAPLLDSEKDADKDQYNVNDSPIEQVRLTVPITDDPTQPALTFRTWILGLASCVLLAFVNQFLDYRTNPLKISSVAAQIITLPLGKLMAATLPTRSIQVPFTTWSFSLNPGPFSLKEHVLITIFASSGSSGVYAINIITIVKAFYHRSIHPVAAYLLALSTQMLGYGWAGIFRKFLVDSPYMWWPENLVQVSLFRAFHEKEKRPKGGSTRLQYFFLVFVASFAYYIVPGYFFQTLSTISFVCLIWKDSITAQQIGSGMKGLGIGSFALDWNTVAGFLGSPLAVPGFAIMNSLAGFVLFIYVVIPLSYWTNLYDAKKFPLISSHTFDSTGETYNVTRILNPKSFDIDMDSYNNYSKIYLSITFAFGYGLSFATLTATISHVALFHGKMIFQMWKKTASAVKAQLGDVHTRIMKKNYEQVPEWWFVSILILMVMMALVACEGFGKQLQLPWWGVLLSLAIASVFTLPIGVIQATTNMSSGLNVITELVIGYMYPGKPLANVAFKTYGHISMVQALAFLGDFKLGHYMKIAPKSMFVVQLVGTVIASSVHFATAWWLLTSIENICDEALLPKGSPWTCPGDDVFYNASIIWGVVGPKRMFTKDGIYPGMNWFFLFGLLAPVPVWLLSRRFPNQKWIKLINIPIITAGASSIPPARSVNYIMWGIVGIFFNFYVYRKFKAWWARHTYILSAALDAGVAFMGLILYFALQSNGIFGPEWWGLDADHCPLARCPTDSGVYAQGCPALELPS* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1273 761 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 5 756 - -
Lja1g1273 761 PANTHER ISP4 LIKE PROTEIN 5 756 IPR004648 GO:0055085
Lja1g1273 761 Pfam OPT oligopeptide transporter protein 57 719 IPR004813 GO:0035673
Lja1g1273 761 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 35 722 IPR004648 GO:0055085
Lja1g1273 761 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 41 721 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1273 Lja-Chr1 13112634 13115255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1273 35 755 Organic Solute Cotransporters AT4G26590 67.867 0.0 1062
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1273 - - gmx:100820498 1357.43