Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1269 ATGGCTATTGCAGCAGCAGCTGTCGTTGTTCCATTGGGTTTGCTGTTCTTCGCTTCAGGCCTCATCGTTAATCTCATTCAGGCAACATGCTATGTCGTTGTAAGGCCACTGTCAAAGAATTTGTACAGGCGGATCAACCGGGAAATAGCAGAACTGTTGTGGCTGGAACTTGTATGGCTTATTGATTGGTGGGCTGGAGTTAAGATTGAAGTATATACAGATCATGAAACCTTTCGGTTGATGGGTAAAGAGCATGCACTTGTCATATGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGTACTCTAGCTGTGATGAAGAAATCATCAAAGTTTCTTCCGGTAATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTTTGGAGAGAAGTTGGGCCAAGGATGAAAGCACATTGAAGTCAGGCCTCCAGCGGTTGAGTGATTTCCCTCTTCCATTTTGGTTGGCTCTATTTGTAGAAGGAACACGCTTTACACAGGCCAAACTCTTAGCTGCACAAGAATATGCAACCTCCACTGGATTGCCTGTTCCCAGAAATGTTTTGATTCCTAGAACTAAGGGGTTTGTTTCAGCTGTAAGTCATATGCGATCATTCGTTCCTGCCATTTATGATGTAACAGTGGCTATCCCCAAGAGTTCACCTGCTCCCACAATGTTAAGACTCTTCAAGGGGCAACCTTCAGTGTTGCAAGTTCATATCAAGCGACATTTGATGAAGGACTTGCCGGAATCAGATGAAGCTGTTTCTCAATGGTGTCGAGATATATTTGTGGCCAAGGATGCGTTGCTAGACAAACACATAGCTGACGACACTTTTAGCGATCAAGAGCTGCAAGATACTGGTCGACCAATGAAGTCTCTTGTGGTTGCTCTATCTTGGGCTGGTCTGGTTATCGCAGGGTCTGTGAAGTTCCTACAATGGTCTTCACTGCTATCGTCGTGGAAGGGTGTTGCATTTTCAACTTTATGTTTGGCTGTTGTTACTGGCCTCATGCACGTCTTGATCCTATTCTCGCAGTCAGAGCGTTCAACCCCAGCCAAGGTGGCCCCTGCAAAGCCAAAGAACAACGGGGAACAACAACTAGATGGTACGAATGACAAACAACAGTAG 1167 0.4524 MAIAAAAVVVPLGLLFFASGLIVNLIQATCYVVVRPLSKNLYRRINREIAELLWLELVWLIDWWAGVKIEVYTDHETFRLMGKEHALVICNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGLQRLSDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMLRLFKGQPSVLQVHIKRHLMKDLPESDEAVSQWCRDIFVAKDALLDKHIADDTFSDQELQDTGRPMKSLVVALSWAGLVIAGSVKFLQWSSLLSSWKGVAFSTLCLAVVTGLMHVLILFSQSERSTPAKVAPAKPKNNGEQQLDGTNDKQQ* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1269 388 Pfam Acyltransferase 78 228 IPR002123 GO:0016746
Lja1g1269 388 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
Lja1g1269 388 MobiDBLite consensus disorder prediction 361 388 - -
Lja1g1269 388 SMART plsc_2 86 208 IPR002123 GO:0016746
Lja1g1269 388 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Lja1g1269 388 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 51 288 - -
Lja1g1269 388 CDD LPLAT_LCLAT1-like 62 253 - -
Lja1g1269 388 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1269 Lja-Chr1 13077615 13084468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1269 3 388 Miscellaneous Gene Families AT3G57650 75.130 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1269 K13523 - gmx:100812696 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1269 1 13077615 13084468 Lja1g1269 1 13077615 13084468 ECH