Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1256 ATGAAAGAAACTGAGAAGAGAAAAGCTTCAAGGAATAGTCAGACAAAGGGTTCTAGAAGAACCGAAAGAAGAGAGGATAAATTGCATCAAGATAATTCATCCAAAACATTGAATGAAAAAGGAACTGAATCTAAGACACCCCAGGATAGATCAGCTGCAAATAATTTAGTAGGCGATTCAAACACTGCCTCAGAGAATTCAGAAACTTATGAAAACGTGGTTATAGATTATGTGGATGATGTCAACAGGTCTGAGGAGGCACTTGCCGAGATGAAAGTTAATGCAATGGTTGCTAACCAGGCCAGTGATACGGAGAAAGAGCAAAAAGAAGGGAATGGAGAAGTATCAGATACTGATACAGTAAAGGATTCAGTGTCATCCCAAGGTGATTCTTTCACAAATGAAGATGAGAAAGTAGAAAAAGCTTCAAAAGATGCAAAAAGTAAGGTCAAAGTGAGTCCCTCAGAAAGCAGTCGTGGATTAAAGGAGAGATCTGATAGGAAAACAAACAAATTGCAATCCAAGGTATCAGATAGCAATCAAAAGAAACCCATGAACTCAACTAAAGGACCTTCCAGAGTTACAAACAAGAATACTTCGTCAAACAATTCTAAGCCTGTGAAAGCTCCTGTAAAAGCTTCTTCAGAATCTTCTGAAGGAGTTGATGAAAACCATGTTCTAGAGGTGAAGGAAATCGAGATCCTGGATGGAGCCTCCAATGGTGCTCAGAGCTTAGGAAGTGAAGATGAAAGACATGAGACAGTTAATGCTGAAGAAAATGGTGAACATGAGGACAAGGCTGCTTTGGAACTAAAAATAGAAGAAATGGAATTACGAGTTGAAAAGCTTGAAGAGGAACTAAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTGTAGTACCAGAGCATGGGAGCTCAGCACACAAGGTGCACACACCTGCTCGGCGCCTTTCTAGGCTCTATTTACATGCGTCTAAGCATTGGACCCAAAATAGGCGAGCAACAATAGCCAAGAATACTGTTTCTGGCCTTATATTGGTTGCAAAGTCTTGTGGTAATGATGTTTCAAGGTTAACATTCTGGTTGTCAAACACCATTGTGCTGAGAGAGATAATTTCACATGCTTTTGGCAATTCATGTCAAGTTAGTCCCCTTATGCGGTTGGCTGAATCGAATGGGGCTGGCAATGGAAAGTCTGCATCCCTGAAATGGAAAGGATTCCCAAATGGTAAAGCAGGAAGTGGTTTCACTCAGTTTGTTGAAGATTGGCAAGAGACAGGAACCTTTACATCTGCCTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGCTAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCTTACATGCAGTCTCCAGCTGGGGACTTCTCTTCAAATAAATCCTTTGGGAGGGTGCTGGGACCTGCACTTGGAGATCATAATCAAGGAAACTTTTCCATCAATCTCTGGAGATATGCTTTCGAAGATGCTTTTCAAAGACTCTGTCCTCTTCGAGCTGGAGGGCATGAGTGTGGTTGTTTGCCTGTGTTGGCTAGAATGGTCATGGAACAGTGCATAGCTAGACTAGATGTTGCCATGTTCAATGCTATTCTTCGGGAGTCAGCCCTTGAGATCCCAACTGATCCTATATCAGATCCTATATTGGATTCAAAGGTTTTGCCAATTCCAGCAGGAGATTTAAGCTTTGGATCTGGTGCACAGCTAAAGAATTCTGTTGGGAATTGGTCTAGGTGGCTTACTGATATGTTTGGCATGGATGTCGAAGATTGTGTGCAAGAATATCAGGACAGCGGTGAGAATGATGAAAGGCAAGGTGGAGATGGCGAACCTAAACCTTTTGTTCTCTTAAACGACTTGAGCGACCTTCTAATGCTCCCAAAAGACATGCTTATAGATAGACACGTCAGAGAGGAGGTATGTCCATCCATCACTCTTTCATTGATAATTAGGGTCCTCTGCAACTTCACCCCGGATGAGTTCTGTCCAGATCCTGTTCCAGGAACTGTCTTGGAGGCCCTGAACGCGGAGACTATTGCGGAACGAAGATTGTCAGCAGAATCTGTCAGAAGCTTCCCTTATGCCGCCGCCGCAGTTGTGTATGTGCCTCCTTCCTCATCTAATGTGGCAGAGAAAGTTGCAGAGGCAGGAGGAAAGTCTCACCTGGCAAGGAATGTATCAGCTGTTCAGAGGAGAGGATATACCAGTGATGAAGAACTGGAGGAACTTGATTCCCCTCTTACATCCATCATTGATAAGCTTCCTTTATCTCCAACTGTCTCTGCTAATGGACAAGATAATCAAAAAGAGCACAAGAGCTATACCACCACTACAAATGCTAGATATCAACTCCTCCGTGAAGTTTGGTCCATGTGA 2400 0.4304 MKETEKRKASRNSQTKGSRRTERREDKLHQDNSSKTLNEKGTESKTPQDRSAANNLVGDSNTASENSETYENVVIDYVDDVNRSEEALAEMKVNAMVANQASDTEKEQKEGNGEVSDTDTVKDSVSSQGDSFTNEDEKVEKASKDAKSKVKVSPSESSRGLKERSDRKTNKLQSKVSDSNQKKPMNSTKGPSRVTNKNTSSNNSKPVKAPVKASSESSEGVDENHVLEVKEIEILDGASNGAQSLGSEDERHETVNAEENGEHEDKAALELKIEEMELRVEKLEEELREVAALEVSLYSVVPEHGSSAHKVHTPARRLSRLYLHASKHWTQNRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISHAFGNSCQVSPLMRLAESNGAGNGKSASLKWKGFPNGKAGSGFTQFVEDWQETGTFTSALERVESWIFSRLVESVWWQALTPYMQSPAGDFSSNKSFGRVLGPALGDHNQGNFSINLWRYAFEDAFQRLCPLRAGGHECGCLPVLARMVMEQCIARLDVAMFNAILRESALEIPTDPISDPILDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDVEDCVQEYQDSGENDERQGGDGEPKPFVLLNDLSDLLMLPKDMLIDRHVREEVCPSITLSLIIRVLCNFTPDEFCPDPVPGTVLEALNAETIAERRLSAESVRSFPYAAAAVVYVPPSSSNVAEKVAEAGGKSHLARNVSAVQRRGYTSDEELEELDSPLTSIIDKLPLSPTVSANGQDNQKEHKSYTTTTNARYQLLREVWSM* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1256 799 MobiDBLite consensus disorder prediction 174 211 - -
Lja1g1256 799 MobiDBLite consensus disorder prediction 246 262 - -
Lja1g1256 799 Coils Coil 266 293 - -
Lja1g1256 799 MobiDBLite consensus disorder prediction 240 262 - -
Lja1g1256 799 MobiDBLite consensus disorder prediction 47 71 - -
Lja1g1256 799 MobiDBLite consensus disorder prediction 103 117 - -
Lja1g1256 799 MobiDBLite consensus disorder prediction 1 46 - -
Lja1g1256 799 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 798 IPR021827 GO:0005643
Lja1g1256 799 PANTHER NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN 11 798 - -
Lja1g1256 799 MobiDBLite consensus disorder prediction 133 173 - -
Lja1g1256 799 MobiDBLite consensus disorder prediction 99 224 - -
Lja1g1256 799 MobiDBLite consensus disorder prediction 118 132 - -
Lja1g1256 799 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1256 Lja-Chr1 12936450 12941717 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1256 - - gmx:100777738 1238.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1256 1 12936450 12941717 Lja1g1256 1 12936450 12941717 ECH