Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1254 ATGGTGCCGAGATGGAAAGGAAAAGATGCAAAAGCTAAAAAGGATGCAGAAGCTGAAGCCCTTAAGGAACCCATGTCAAAGACGATATCTCAGCTTCAATCTTCTCTAGTTCAATCAGATACATGTGGATTTCTCTCTGGCAACAGTGTGCACGTAGCAGTTGGAGCAGAACAAATTGATCTGCTTGATAAAGCATGCTTTGGTCGGCCTGTGAGAACAGTTGAAAAAGATAAACACTTGATTCAGTTAAACTTAGAGGAAGCTTTCTACCTGTGCTATTCCTTAAAATGCCTCAAGATTAATGGTGGTGATACTGGTCCTCAAAATGATGAAGAGCTATGGCATTACATGAAGTCAAGGAATGAAACATTCGCTTGTTTATATGTACATTGTCAATCGATAAGGACATGGAAAATCATATTGAATATGAAAAATACATTTATAGGCTTTGTCAAAAAGACACACACACACATATATATGTATGATTGTTATTGA 495 0.3737 MVPRWKGKDAKAKKDAEAEALKEPMSKTISQLQSSLVQSDTCGFLSGNSVHVAVGAEQIDLLDKACFGRPVRTVEKDKHLIQLNLEEAFYLCYSLKCLKINGGDTGPQNDEELWHYMKSRNETFACLYVHCQSIRTWKIILNMKNTFIGFVKKTHTHIYMYDCY* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1254 164 Pfam tRNA intron endonuclease, N-terminal domain 43 114 IPR006678 GO:0000213|GO:0006388
Lja1g1254 164 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2-1-LIKE 1 140 - -
Lja1g1254 164 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 1 140 IPR006676 GO:0000213|GO:0006388
Lja1g1254 164 Gene3D - 42 121 - -
Lja1g1254 164 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1254 Lja-Chr1 12918213 12918707 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1254 K15322 - gmx:100810335 199.134