Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1240 ATGGGAACTATATTGGGACTGTGCTTCCTTTTGTTGCTCTCCTTCTCTCATGTTGCATTCTCAGGGCGGTGCAACCCAGAGGACAAGAAAGTGCTGCTCCAAATCAAGAAGGACCTCAACAACCCTTACCTCCTAGCCTCATGGAACCCAGAAACAGCTTGCTGCGATTGGTATTGTGTAGAATGCGATCCAAAAACGCACCGCATCACGTCACTTATCATATCTTCCTCTGTCCCGGAGACCAATTTCTCGGGCCAAATACCACCCTCCGTAGGTGACCTCCCTTATTTGCAGGTTCTTGAATTCCACAAGCTACCCAAACTCACTGGCCCAATCCAGCCCGCCATTGCCAAACTCACCAACCTCAGGTGGCTCATTCTCACATGGACCAATATTTCCGGCCCAATACCCGATTTCTTGTCCGAGCTACCCAACCTTCAATGGCTTCATCTTTCCTTCAATAACCTCACAGGCCCAATACCGAGCTCACTTTCCAAGCTACCCAACCTCATAGACTTGCGTTTGGACCGGAACAGGCTCACAGGCCCAATCCCAGACTCGTTCGGGTCATTCAAGAAGCCCGGCATAGATCTCACCTTGTCTCATAACCAGCTTTCCGGGCCTATTCCGACCTCCTTGGGCCTCATTGACCCTAATAGGATAGATTTCTCGAGGAACATGCTTGAAGGCGATGCCTCCATGCTTTTTGGGGTCAACAAAACGACGGAAATGATTGACCTTTCGAGGAACTTGCTAACATTTGATATGTCGAAAGTGGAGCTTCCCACGAGCTTGATATCGTTGGATCTGAATCACAATCAGATTTATGGAAGCATTCCCCAGGAATTGATCAAAGTGGATTTTTTGCAGGCTTTCAATGTGAGCTATAATAGGTTGTGCGGTGAGATACCACAAGGTGGGAGATTGCAAAGGTTCCAGGTGGATACGTATTTTCACAATAGGTGCTTGTGTGGATCCCCTCTTCCCAGCTGCAAGTGA 999 0.4855 MGTILGLCFLLLLSFSHVAFSGRCNPEDKKVLLQIKKDLNNPYLLASWNPETACCDWYCVECDPKTHRITSLIISSSVPETNFSGQIPPSVGDLPYLQVLEFHKLPKLTGPIQPAIAKLTNLRWLILTWTNISGPIPDFLSELPNLQWLHLSFNNLTGPIPSSLSKLPNLIDLRLDRNRLTGPIPDSFGSFKKPGIDLTLSHNQLSGPIPTSLGLIDPNRIDFSRNMLEGDASMLFGVNKTTEMIDLSRNLLTFDMSKVELPTSLISLDLNHNQIYGSIPQELIKVDFLQAFNVSYNRLCGEIPQGGRLQRFQVDTYFHNRCLCGSPLPSCK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1240 332 SUPERFAMILY L domain-like 23 331 - -
Lja1g1240 332 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Lja1g1240 332 Gene3D Ribonuclease Inhibitor 23 332 IPR032675 -
Lja1g1240 332 PANTHER POLYGALACTURONASE INHIBITOR 1 8 331 - -
Lja1g1240 332 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Lja1g1240 332 PANTHER POLYGALACTURONASE INHIBITOR 2 8 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1240 Lja-Chr1 12812998 12814220 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1240 83 329 Receptor kinase-like Gene Family AT5G46330 30.545 2.55e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1240 - - aprc:113862147 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1240 1 12812998 12814220 Lja1g1240 1 12812998 12814220 ECH