Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1224 ATGCAGGGAGCAAAGAAAGCTACTGAGACCATGAAAGAAACTGCTGCCAACATTGGTGCTTCTGCCAAATCCGGTAAGGAGAAGACCAAGGCCACCGTTCAGGAAAAGGCAGAAAAGGTGACGGCAGGTGACCCTGTGCAAAAGGAGATGGCAACACAGAAGAAAGAGGCAAAGGTGAGCCAGGCGGAGCTGGATAAGCTGGCGGCGCGTGAGCACAACGCGGCGACCAAACAGTCGGCAGCAGCAGCTGCTCACATGGGGACTGGGACCGGAACCGGAACAGCGGCGTACTCAACCACAGGGGCACATGGGCAGCCCATGGGGGCCCATCAGACCTCAGCTTTGCCTGGCCATGGAACTGGACATAATACCCGTGTGGGTGGAAACCCAAATGCCACTGGGTATGGGACTGGCGGTACTTACAATTAA 429 0.5641 MQGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGYGTGGTYN* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1224 142 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 46 1 141 - -
Lja1g1224 142 MobiDBLite consensus disorder prediction 1 142 - -
Lja1g1224 142 MobiDBLite consensus disorder prediction 116 142 - -
Lja1g1224 142 Pfam Late embryogenesis abundant (LEA) group 1 9 78 IPR005513 GO:0009793
Lja1g1224 142 MobiDBLite consensus disorder prediction 28 72 - -
Lja1g1224 142 Coils Coil 50 70 - -
Lja1g1224 142 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 1 141 IPR005513 GO:0009793
Lja1g1224 142 MobiDBLite consensus disorder prediction 91 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1224 Lja-Chr1 12634251 12635687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1224 - - lja:Lj1g3v4317620.1 215.698