Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1219 ATGATGGTCAAAGCTTTACAGTTTCAGCTATATCGCTGGAGTTGGAAACCTCTCACCTCCATTTCAATCTCCTCATCACTCTCTCTATTCCCACAATTCCCTAACAACAACCACAACCCTTTTCTCAACGCCGCCGTCACTCCTCGATTCGCACCGTTTCGTGCTTCTTCTTCTTCTTCCTCTTCCGCCGCTGTTCCTGCAAATGTTCGAAGCATCAAGTTCTGTCAGTGGTGTGGTGGTTCGACCAAGCATGATATACCTGACGGGGAAGAGAAATTCAGAGCTATTTGTACTGTTTGTGGCAGGATTGCCTATCAGAATCCCAAAATGGTAGTTGGTTGCCTTATCGAACATGATAACAAGGTCCTCCTTTGCAAGAGGAATATTCAACCATCTCATGGCCTTTGGACGCTTCCTGCTGGTTATTTGGAAATTGGAGAGTCAGCTGTGGAGGGTGCCATCAGGGAAACAAGGGAGGAAGCAAATGCAGATGTAGAAGTAATTTCTCCCTTTGCCCAATTGGATATTCCTTTAATTGGCCAAACTTACATGATATTCTTAGCAAAGCTGAAGAAGCCCGATTTTTCACCTGGTCCAGAATCATCAGAATGCCAACTTTTTCCACTTGATGATCTACCTTTTAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATATTAAGGCTGGAAAACCCAAATTCCACTATGGAACTATTATGAAAAGGCCGGGTACAAGTCCTTCTGATATTAATGCCTACACACTGGATTATCATATGCACACATGA 804 0.4316 MMVKALQFQLYRWSWKPLTSISISSSLSLFPQFPNNNHNPFLNAAVTPRFAPFRASSSSSSSAAVPANVRSIKFCQWCGGSTKHDIPDGEEKFRAICTVCGRIAYQNPKMVVGCLIEHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQTYMIFLAKLKKPDFSPGPESSECQLFPLDDLPFNSLSFSSMVVTLSLYVEDIKAGKPKFHYGTIMKRPGTSPSDINAYTLDYHMHT* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1219 267 PANTHER BNAA03G19740D PROTEIN 58 266 - -
Lja1g1219 267 SUPERFAMILY Nudix 73 231 IPR015797 -
Lja1g1219 267 ProSitePatterns Nudix box signature. 141 162 IPR020084 GO:0016787
Lja1g1219 267 ProSiteProfiles Nudix hydrolase domain profile. 107 230 IPR000086 -
Lja1g1219 267 Gene3D - 71 106 - -
Lja1g1219 267 Pfam Nudix N-terminal 73 106 IPR029401 -
Lja1g1219 267 Pfam NUDIX domain 111 212 IPR000086 -
Lja1g1219 267 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 107 258 - -
Lja1g1219 267 PANTHER NUDIX HYDROLASE 23 58 266 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1219 K18453 - gmx:100808417 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1219 1 12591214 12595282 Lja1g1219 1 12591214 12595282 ECH