Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1207 ATGGCTGATGCCACCAAGTACATTCCCATCGGCGGCGGCAACGTCGTCACCGACCTCAGAAGCCTCTTCTCAATCCTCAAACCCAGAAAAACCGTTGCGTTTGCCTATGTTTTTATGCTCGTCTTCATCGCTTTCACTGTTTTCTTAGCTTTTTCCCCTTCTCCTAACGCTTCATCTCCCTGGTTCACCAACATCTTCTCCTCCTCCTCCTCCGCCACCACCGCCACCACCACCACCACCGGTTCCTCTAAATCTCAACTGTCTTCCATTTTCTCCTACTTTTTCCCTAACTCCCCTTCTTCATCCCCAAATCCTTCACCGTCGCAGAGCAACAGTTCTAGATCTAGCAATGCTCCTTCTCCATCTCCTAATCCCAAAACCAGCACAGAAACATTGGCAGCAACCGCTTCACAAAACCAAACTCAGAGATCAGTGAATTCAACCAGAGATGCAGTTTCTGCTCCCAGCACGAACCAGACCACGATCTCCAACTCGAATTCTCCGGTTGCAAGCTTGCCGGTGAAAAACCAAACCACAAGTGTTGCTGATGCTGCTGCTCCGGCATCCAGTGTTCCGGTGGCTTATCCTCCTCCGTTGAAGCCTCACCAGAATTTGAGTTCCGATTCTCCGGGGAAGGGTGTTGCTGTGTCGAAGAATTATACGGCTTCTCTGGCGAGGAAAAAGAGCGATGGGAATAGGGAGAGGGAGGAGTTGATGCAGTCTCTGATGAAGTGTGATTTCTTTCATGGAGAGTGGGTTAGGGATGAATCTTACCCTCTCTATGAGCCAGGTTCTTGCTCTATGATCATCGATGAACAGTTCAACTGTATTCGAAATGGAAGGCCTGATAAGGACTATCAGAAATACAAGTGGCAGCCCAAGGATTGCAAGCTCCCAAGGTTGGATGGGCATCGAATGCTGGATTTATTGAGAGGCAAGCGTCTCGTGTTCGTTGGTGATTCCCTCAATAGGAACATGTGGGAGTCTCTGATTTGCATACTGAGAAATGCTGTGAAAGATAAAAGCAAAGTTTATGAAGCTAATGGCAGAGTCCATTTCAGAGGAGAGGCCTCTTATTCATTCATATTCAAAGATTATAACTTCACCGTGGAGCTTTTTGTATCCCCGTTCCTGGTTCAAGAGTGGGAAATGCCTGATAAGAACGGGACAAAGAAGGAAACGCTTCGTCTCGATTTAGTTGGTAGATCATCATCTCAATATAAAGATGCAGATATTATTGTCTTCAACACTGGCCACTGGTGGACTCATGATAAAACTTCTAAAGGGAAGGACTATTACCAAGAAGGTAGCCATGTCTATGAGGAATTAAATGTTCTTGAGGCATTCCGGAAAGCTATAACAACTTGGAGCAGGTGGGTTGACGCCAACGTAAATCCATCCAAGTCCATAGTCCTCTTCAGAGGCTATTCTGCTTCCCATTTCAGTGGTGGGCAGTGGAATTCTGGTGGACAATGTGATCATGAAACTGTGCCTATTGATAATGAGAAGTACCTAACAGAGTACCCACCAAAGATGAGGGTTTTGGAGAAGGTGCTGAAGAATATGAAAACCCATGTGACCTACCTCAATATCACTAGATTGACAGATTTCAGAAAGGATGGTCATCCTTCAATGTACAGGAAGCTAAACCTATCACCGGAAGAAATGAAATCACCATTGATGTTCCAAGACTGCAGTCACTGGTGCCTTCCTGGTGTTCCTGATGCGTGGAATGAGATTCTTTATGCTGAACTTCTAATCAGAGAGTATCAGAATCAGAAACAGAATCAGCAGAAAAGACCTTAG 1806 0.4585 MADATKYIPIGGGNVVTDLRSLFSILKPRKTVAFAYVFMLVFIAFTVFLAFSPSPNASSPWFTNIFSSSSSATTATTTTTGSSKSQLSSIFSYFFPNSPSSSPNPSPSQSNSSRSSNAPSPSPNPKTSTETLAATASQNQTQRSVNSTRDAVSAPSTNQTTISNSNSPVASLPVKNQTTSVADAAAPASSVPVAYPPPLKPHQNLSSDSPGKGVAVSKNYTASLARKKSDGNREREELMQSLMKCDFFHGEWVRDESYPLYEPGSCSMIIDEQFNCIRNGRPDKDYQKYKWQPKDCKLPRLDGHRMLDLLRGKRLVFVGDSLNRNMWESLICILRNAVKDKSKVYEANGRVHFRGEASYSFIFKDYNFTVELFVSPFLVQEWEMPDKNGTKKETLRLDLVGRSSSQYKDADIIVFNTGHWWTHDKTSKGKDYYQEGSHVYEELNVLEAFRKAITTWSRWVDANVNPSKSIVLFRGYSASHFSGGQWNSGGQCDHETVPIDNEKYLTEYPPKMRVLEKVLKNMKTHVTYLNITRLTDFRKDGHPSMYRKLNLSPEEMKSPLMFQDCSHWCLPGVPDAWNEILYAELLIREYQNQKQNQQKRP* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1207 601 MobiDBLite consensus disorder prediction 99 172 - -
Lja1g1207 601 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 298 583 IPR026057 GO:0016740
Lja1g1207 601 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 19 592 - -
Lja1g1207 601 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 592 IPR029962 GO:0016413
Lja1g1207 601 Pfam PMR5 N terminal Domain 244 297 IPR025846 -
Lja1g1207 601 MobiDBLite consensus disorder prediction 192 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1207 Lja-Chr1 12410238 12413496 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1207 - - gmx:100811425 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1207 1 12410238 12413496 Lja1g1207 1 12410238 12413496 ECH