Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1195 ATGGCGTCGAAACAAGGACCGAAATCGAGGCGGTGCGGATCGACCAGCGGCGGCGGCGGAGTAAGAGGCGCTGCTGCGAATTCCCATTCCTCGTCGACAACTTCGAGTTCTAAGCAGTTTCAGGATGTCTCCGGTGGCGACGGTCAGAGCTCGCCGGCGTCTTCGTCTGCTCGGAGCAAGCCGCCGCAGCAGCATTTTTACCCGGAGGCTGAGCAGAGAACTAAAGAGAATGTCACTGTGACGGTTAGGTTTCGGCCTTTGAATCCAAGGGAGATTCGTCAAGGCGAGGAGATTGCTTGGTATGCGGACGGGGACACCATTGTGCGGAATGAGTATAACCCTTCCATTGCATATGCATACGATCGTGTATTTGGTCCCACAACCACAACTCGTCATGTGTATGATGTTGCTGCTCAGAATGTCGTTAGTGGTGCTATGGAGGGCATCAATGGTACAGTCTTTGCCTATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCACTTGCTGTGAAGGATGCTTTTAGCATTATCCAAGAGACACCAAACCGAGAGTTTCTCCTTCAAGTTTCATACTTGGAAATCTACAATGAGGTGGTTAATGACTTATTAAATCCAGCAGGGCAGAACTTAAGAGTCAGAGAGGATGCTCAGGGAACCTTTGTTGAGGGAATAAAGGAAGAAGTTGTACTCTCCCCTGCTCATGCCCTGTCCCTTATTGCAGCTGGAGAAGAGCACAGGCATGTTGGGTCCACAAACTTCAATGTACTCAGCAGCAGGAGCCATACGATATTTACCCTGACCATAGAGAGTAGTCCGTGTGGTGAAAATAGTGAAGGAGAAGCAGTAACACTGTCACAACTGAATCTCATCGATCTAGCAGGTTCTGAGAGCTCTAAAGCTGAAACAACTGGCATGAGAAGGAGAGAAGGATCTTATATTAATAAAAGTCTTCTAACTCTTGGAACTGTTATTTCAAAATTGACTGAAGATAGAGCTAGTCACATACCTTATAGGGACTCCAAATTGACTAGAATACTTCAGTCTTCACTCAGTGGTCATGGACGTGTATCTCTCATTTGCACAGTAACTCCTTCATCAAGTAGCACTGAAGAGACACATAATACATTGAAATTTGCTCACCGGGCAAAGCACATTGAGATACAAGCAGCACAAAACAAGATAATTGATGAGAAGTCACTTATCAAGAAATACCAGCAAGAGATTCAATGCTTGAAGGAAGAGTTGGAGCAATTAAAGAGGGGAATTGTCACCGTTCAGCCAAAAGATACTGGGGATGATGACATAGAGCTTCTAAAACAAAAGTTAGAAGATGGTCAAGTTAAGCTGCAATCCAGATTGGAACAAGAAGAAGAAGCTAAAGCTGCTTTGTTAGGCAGAATTCAACGGTTGACTAAGTTGATTTTAGTCTCCACAAAAGCATCACAGTCAACGAGATTTTCCAACAGGCCTGGCTCTCGTAGAAGACATTCCTTTGGGGAAGAAGAGCTGGCATACCTTCCATACAAAAGGCGGGATTTAATATTAGACGAGGAAAATATTGATTTGTATGTTAACCTGGAAGGTAATGCTGCAACATCTGATGATTCTTTTAAGGAGGAGAAAAAGACAAAGAAACATGGACTTCTAAATTGGTTGAAGTTGCGTAAACGAGATAGTTCCTTGATAGGATCTAGTGATAAATCTAGTGGAGCGAAATCTACTAGCACACCTTCTACACCTCAAGCAGAAAGTGGTAATAATGTTGGGTCAAGACTTTCCCATTCTCTACCTGCAGAAAGCTCTCCATCTGCTGATCATATATCAGAGGCAATAGAGGATAAAGATCTTCATGAGGATAGTTTATTGGGACAAGAGACACCTTTGACAAGCACCAAATCAGTTGATCAGATTGATCTTCTAAGGGAACAGCATAAGATTTTATCTGGAGAAATGGCACTTCATTCAAGTGCTTTGAAGAGGCTGTCTGAGGAAGCAGCAAGAAATCCTCAGAATGGTCAGATTCATGTGGAGATGAAAAGGTTGAAAGATGAAATTAAGTCGAAGAATGAACAAATAGATTTGCTGGAAAAGCGAATTTCTAGTCACTCCTTTGCTTCAGATAAGACAGATCAATCCGGAGTATCACATACTGTTGCTGAGCTGATAGCACAATTAAATGAGAAGTCTTTTGAACTTGAGGTCAAAGCAGCAGACAACCGTATAATTCAAGAACAGCTTAATCAGAAGATCTGTGAATTTGAAAGCCTGCAAGAAACAGTTGCCTCTTTCAAACAGCAACTTGCAGATGCATTAGAGTTAAGAAATTTCAATCCTGTAGACAATCATTTACAGCATTCCTCTGTAACCAACAACTATCATGGTGAACTTCACCTTGACAAGGGAAACATAAGCAACGCCAATGAAGGGATTCTTTTGCAGTCACAGATAAGTGAGATAGAAGAGCTGAATCAGAAGGTAGCAGAACTAACAGAATCAAAGGAGCAGCTAGAGATTAGGAATCGGAAACTGGCAGAAGAGAGTACATATGCTAAAGGGCTAGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTATCAGAAGAAGTTGCCAAACTCATGAACCATAACGAGAAACTAGCTGCGGAGCTAGCTGCGTCCAAGAATTCACCCACACAACGTAGAACTAGTGGAACAATCCAAAATGGGCGAAGGGAAAGTCATGTCAAACCTAGACGAAATGATCAGGGTGGATCAAACTCGGATACCAAGAGAGAATTGGCCTTGAGTAAAGAAAGGGAACAGTCATATGAAGCTGCTCTTTTAGAAAAAAATCAGAAAGAGGCCGAACTTCAAAGAAAGGTTGAGGAGTCAAAGCAAAGGGAAGCATACCTGGAAAATGAACTTGCCAACATGTGGGTTCTTGTGGCAAAGCTAAAAAAGTCACACGGAGCTGAAACTGATGTTTCAGGGTCGACTAGAGGGAGTTTGCAGTTCGATGGTTTTGACTTTTAA 3042 0.4306 MASKQGPKSRRCGSTSGGGGVRGAAANSHSSSTTSSSKQFQDVSGGDGQSSPASSSARSKPPQQHFYPEAEQRTKENVTVTVRFRPLNPREIRQGEEIAWYADGDTIVRNEYNPSIAYAYDRVFGPTTTTRHVYDVAAQNVVSGAMEGINGTVFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLQVSYLEIYNEVVNDLLNPAGQNLRVREDAQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNVLSSRSHTIFTLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEDRASHIPYRDSKLTRILQSSLSGHGRVSLICTVTPSSSSTEETHNTLKFAHRAKHIEIQAAQNKIIDEKSLIKKYQQEIQCLKEELEQLKRGIVTVQPKDTGDDDIELLKQKLEDGQVKLQSRLEQEEEAKAALLGRIQRLTKLILVSTKASQSTRFSNRPGSRRRHSFGEEELAYLPYKRRDLILDEENIDLYVNLEGNAATSDDSFKEEKKTKKHGLLNWLKLRKRDSSLIGSSDKSSGAKSTSTPSTPQAESGNNVGSRLSHSLPAESSPSADHISEAIEDKDLHEDSLLGQETPLTSTKSVDQIDLLREQHKILSGEMALHSSALKRLSEEAARNPQNGQIHVEMKRLKDEIKSKNEQIDLLEKRISSHSFASDKTDQSGVSHTVAELIAQLNEKSFELEVKAADNRIIQEQLNQKICEFESLQETVASFKQQLADALELRNFNPVDNHLQHSSVTNNYHGELHLDKGNISNANEGILLQSQISEIEELNQKVAELTESKEQLEIRNRKLAEESTYAKGLASAAAVELKALSEEVAKLMNHNEKLAAELAASKNSPTQRRTSGTIQNGRRESHVKPRRNDQGGSNSDTKRELALSKEREQSYEAALLEKNQKEAELQRKVEESKQREAYLENELANMWVLVAKLKKSHGAETDVSGSTRGSLQFDGFDF* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1195 1013 CDD KISc_CENP_E 77 396 - -
Lja1g1195 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 431 IPR027417 -
Lja1g1195 1013 MobiDBLite consensus disorder prediction 895 913 - -
Lja1g1195 1013 Coils Coil 823 857 - -
Lja1g1195 1013 SMART kinesin_4 75 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1195 1013 Coils Coil 764 784 - -
Lja1g1195 1013 MobiDBLite consensus disorder prediction 25 62 - -
Lja1g1195 1013 Gene3D Kinesin motor domain 67 427 IPR036961 -
Lja1g1195 1013 PANTHER CENTROMERE PROTEIN E 56 1003 - -
Lja1g1195 1013 MobiDBLite consensus disorder prediction 1 77 - -
Lja1g1195 1013 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 56 1003 - -
Lja1g1195 1013 Pfam Kinesin motor domain 83 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1195 1013 MobiDBLite consensus disorder prediction 574 613 - -
Lja1g1195 1013 Coils Coil 682 709 - -
Lja1g1195 1013 Coils Coil 946 977 - -
Lja1g1195 1013 MobiDBLite consensus disorder prediction 893 943 - -
Lja1g1195 1013 PRINTS Kinesin heavy chain signature 297 315 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1195 1013 PRINTS Kinesin heavy chain signature 262 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1195 1013 PRINTS Kinesin heavy chain signature 346 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1195 1013 PRINTS Kinesin heavy chain signature 148 169 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g1195 1013 Coils Coil 872 899 - -
Lja1g1195 1013 ProSitePatterns Kinesin motor domain signature. 296 307 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja1g1195 1013 Coils Coil 398 432 - -
Lja1g1195 1013 MobiDBLite consensus disorder prediction 914 943 - -
Lja1g1195 1013 MobiDBLite consensus disorder prediction 572 616 - -
Lja1g1195 1013 Coils Coil 450 484 - -
Lja1g1195 1013 ProSiteProfiles Kinesin motor domain profile. 77 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1195 Lja-Chr1 12294165 12312762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1195 1 725 Miscellaneous Gene Families AT5G06670 69.041 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1195 K11498 - gmx:100815027 1634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1195 1 12294165 12312762 Lja1g1195 1 12294165 12312762 ECH