Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1191 ATGGCCAAATCCAAAGCTTTGATGCCCACTTTCTTTATCTCATTGAACCTTATTTTCCTCTTCTCCTCCGTAGTCACAGCCTCTTACTCTAAAACCATATCACCAACACTATTGGGCTTCCGTGAAGAGAAGCTCACCCACCTCCACTTTTACTTCCATGATATTGTCGCGGGCCCAAACCCGAGCATGGTCATCGTGGCCGAGCCAAACGGGAAGGCCCCAAATTCCCTCCCGTTCGGAACGGTGGTGGCCATGGACGACCCCTTGACTGAGGGGCCCGAGCGTGACTCCAAGCTCGTGGGAACCGCACAGGGGATTTACACCTCGATATCTCAGAACACTCCGGATGACATGGGGCTTATGATGGTGATGACATTAGCTTTCTCTGAGGGAGAGTTTAACGGAAGCACGCTATGTATGATGGGGAGGAACATGATCATGCGGTACCCTGTGAGGGAAATGGCCATTGTTGGTGGCACTGGAGCTTTTCGACTTGCTCGTGGGCATACTGAGGGCAAGTTTCATTCAGTTGATTTCACCACAGGAGATGCAACTGTGGAATACGATGTTTATGTCTACCATTACTGA 588 0.5051 MAKSKALMPTFFISLNLIFLFSSVVTASYSKTISPTLLGFREEKLTHLHFYFHDIVAGPNPSMVIVAEPNGKAPNSLPFGTVVAMDDPLTEGPERDSKLVGTAQGIYTSISQNTPDDMGLMMVMTLAFSEGEFNGSTLCMMGRNMIMRYPVREMAIVGGTGAFRLARGHTEGKFHSVDFTTGDATVEYDVYVYHY* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1191 195 Pfam Dirigent-like protein 46 192 IPR004265 -
Lja1g1191 195 Gene3D - 38 188 IPR044859 -
Lja1g1191 195 PANTHER NUCLEOPORIN-RELATED 10 194 IPR004265 -
Lja1g1191 195 PANTHER DIRIGENT PROTEIN 10 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1191 Lja-Chr1 12260047 12261021 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1191 - K25075 gmx:100817686 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1191 1 12260047 12261021 Lja1g1191 1 12260047 12261021 ECH