Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1190 ATGACAAACTCCAAAGCCCTCTGTTCCACTTTCCTCATTAATTTTCTCCTATTCTTCTCCATGGTGAGTGCTAGTTACTATGAAAATCTCTCCCCAACACACTTAGGTTTCAAAGAGGAGAAGCTCACACACATACGCTTCTTTTTCCATGACATCGTTACGGGCCCAAAGCCCACCATGGTCATATCTGTCGAGTCACCCCTCAAGGGCAGCTCCAAGTCTCCATTGCCCTTCGGATCCATTGTGGTGCTTGAGGACCCACTGACGTTGGGACCCGAACTTGATTCCAAACTTATTGGAAAAGCCCAAGGGTTTTACATAACAGTGGCCCAAGAGGCTGAGCTGTACTTGGAGTTAATTATGGGGATGACATTTACGTTCATGGAAGGGAAATTTAATGGGAGCACCATCACTGTCATGGGGCGCAATACCATATCATCTCCCGTGAGGGAGATGCCAATCACTGGTGGGACTGGGGCTTTCAGATTTGCTCGTGGTTTTGTTCAACCAAAGACTCACCAGGTCGATTACTACAAAGGTGATGCTGTTGTCGAATACAACGTCTACGTGTTCCACTATTCTTCCACCTCTTCATCCCAGGAGGTTTTTAGCGACGGAACCCAATTCATGGCAGACCCGATACTTAGCAAAAATTAA 657 0.4673 MTNSKALCSTFLINFLLFFSMVSASYYENLSPTHLGFKEEKLTHIRFFFHDIVTGPKPTMVISVESPLKGSSKSPLPFGSIVVLEDPLTLGPELDSKLIGKAQGFYITVAQEAELYLELIMGMTFTFMEGKFNGSTITVMGRNTISSPVREMPITGGTGAFRFARGFVQPKTHQVDYYKGDAVVEYNVYVFHYSSTSSSQEVFSDGTQFMADPILSKN* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1190 218 PANTHER DIRIGENT PROTEIN 8 201 - -
Lja1g1190 218 Pfam Dirigent-like protein 43 191 IPR004265 -
Lja1g1190 218 PANTHER NUCLEOPORIN-RELATED 8 201 IPR004265 -
Lja1g1190 218 Gene3D - 32 190 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1190 Lja-Chr1 12194699 12195672 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1190 - - gmx:100790549 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1190 1 12194699 12195672 Lja1g1190 1 12194699 12195672 ECH