Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1189 ATGAGCAATTCCTCCAAATTCATTTCTTCCACTCTCCTCGTTTCCCTAACCATTAATACTTTTCTCTTATTCTCCTCCATGGTGAATGCTAGTTATTATGAAAAGATCTCCCCAACACAGCTAGGTTTCAAAGAGGAGAAGCTCACCCACCTTCGCTTCTTCTTCCATGACATTGTAACAGGCCCGAAGCCCTCCATGGTCATATCCGTCGAGTCACCCATCAAGGATAAGTCCAAGTCTCCACTGCCCTTCGGATCTATTGCGGTGATGGAGGACCCATTGACGTTGGGTCCCGAACTCGATTCCAACCTTATTGGAAAGGCCCAAGGGTTTTACATGACAGTGTCTCAGGAAGCTGAGTTGTACTTGGAGTTAATAATGGGAATGACATTTACATTTATGGAAGGTGAATTCAATGGGAGCACGATCACTATAATGGGGCGTAATGCTATATCTTCTCCCATAAAAGAGATGCCAATTATTGGTGGGACAGGGGCTTTCAGGTTCGCACGTGGATTTGTTCAACCAAAGACTCACCGGGTAGATTACTACAAAGGTAATGTTGTTGTCGAGTACAATGTCTATGTGTTCCATTATTCATCCCCCTCTTTGTCTCATGAAATTTAA 627 0.4386 MSNSSKFISSTLLVSLTINTFLLFSSMVNASYYEKISPTQLGFKEEKLTHLRFFFHDIVTGPKPSMVISVESPIKDKSKSPLPFGSIAVMEDPLTLGPELDSNLIGKAQGFYMTVSQEAELYLELIMGMTFTFMEGEFNGSTITIMGRNAISSPIKEMPIIGGTGAFRFARGFVQPKTHRVDYYKGNVVVEYNVYVFHYSSPSLSHEI* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1189 208 Pfam Dirigent-like protein 49 197 IPR004265 -
Lja1g1189 208 Gene3D - 37 194 IPR044859 -
Lja1g1189 208 PANTHER NUCLEOPORIN-RELATED 14 202 IPR004265 -
Lja1g1189 208 PANTHER DIRIGENT PROTEIN 14 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1189 Lja-Chr1 12177534 12178160 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1189 - - lja:Lj0g3v0352129.1 259.996