Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1187 ATGACCAACTCCTCCAAAACCATTTCTGCCACTCTCCTAGTTTCCCTTGCGCTTATTACTTTTCTCTTCTCCTCCACGGTGAATGCTAGTTATTATGAAAAGATTTCCCCAACACAGCTAGGTTTCAAAGAGGAGAAGCTCACCCACCTTCGCTTCTTCTTCCATGACATCGTTACGGGCCCGAAGCCCTCCATGGTCATATCCGTCGAGTCACCCATCAAGGATAAGTCCAAGTCTCCACTGCCCTTCGGATCCATTGTGGTGATGGAGGACCCATTGACGTTGGGTCCCGAACTCGATTCCAACCTCATTGGAAAAGCCCAAGGGTTTTACATGACAGTAGCCCAGGAAGCTGAGCTGTACTTGGAGCTAATCATGGGAATGACATTTACGTTCATGGAGGGTGAATTTAACGGGAGCACCTTAACTGTCATGGGGCGTAACACCATATCGTCTCCCATAAGGGAGATGCCAATCGTTGGTGGGACAGGGGCTTTCAGGTTTGCACGTGGTTTTGTTCAACCAAAGACTTACCAGGTTGATTACTACAAAGGTGATGCTGTTGTCGAGTACAACGTCTATGTGTTCCATTATACATCCCCATCTTCGTTCTGGGATGTTTAA 624 0.476 MTNSSKTISATLLVSLALITFLFSSTVNASYYEKISPTQLGFKEEKLTHLRFFFHDIVTGPKPSMVISVESPIKDKSKSPLPFGSIVVMEDPLTLGPELDSNLIGKAQGFYMTVAQEAELYLELIMGMTFTFMEGEFNGSTLTVMGRNTISSPIREMPIVGGTGAFRFARGFVQPKTYQVDYYKGDAVVEYNVYVFHYTSPSSFWDV* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1187 207 Pfam Dirigent-like protein 48 196 IPR004265 -
Lja1g1187 207 Gene3D - 36 192 IPR044859 -
Lja1g1187 207 PANTHER DIRIGENT PROTEIN 5 201 - -
Lja1g1187 207 PANTHER NUCLEOPORIN-RELATED 5 201 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1187 Lja-Chr1 12165402 12166408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1187 - - gmx:100790549 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1187 1 12165402 12166408 Lja1g1187 1 12165402 12166408 ECH