Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1155 ATGGCGACTGTTGCGGACATTGCTACTTCCGCAGCCATCAATCTGTTGTCTGCAGTTGCATTCCTGGTGGCTTTTGCGGTGTTGCGGCTTCAGCCTTTCAACGATCGCGTCTACTTCCCGAAATGGTACCTCAAAGGGATAAGAGGCAGCCCCACATCTTCCAGCTCGCTTGTGAAGAAATTTGTTAACCTTGACTTCAGGACCTACATTAGGTTTCTGAATTGGATGCCTGCCGCGCTGCATATGCCTGAGCCTGAGGTTATTGATCACGCAGGGCTTGACTCGGCTATCTATATTCGGATCTACATTCTCGGCATCAAAATATTTGCCCCGATTACGGTTCTTGCTTTTATTGTTTTGGTTCCTATTAACTGGACCGGGAAAACTTTGGAAGCACCGGGAGCCAAGGAGTTGACGTTTAGCAGTATTGACAAGATTTCAATATCAAACATTCCATTTGGATCACAAAGATTTTGGGCACATATTGTCATGTCATATGTCTTCTCAACTTGGACATGCTATAGTCTTTACAAGGAGTACAGGATTATAGCAACAATGAGATTGCGATTTTTGGCGTCTGAACGTCGTCGACCAGACCAATTTACTGTGCTAGTCAGGAATGTTCCCCCAGATCCCGATGAATCAGTCAGTGAGCACATTGAACATTTCTTTTGCGTCAATCATCCTGATCACTACCTGATGCATCATGTTGTTTATAATGCAAATAAGCTTGCATCAATAGTTGCAAAGAAGAAGAAATTGCAAAACTGGTATATTTACTACCAGAACAAATATGAAAGAGATCCTTCAAAGAGACCAACTACTCGGACAGGTATTATGGGTATTATTGGGACTAAAGTTGATGCTCTTGATCACTATACTGCAGCAATTGATCAATTGAGCCTACAAGAAGCTGTAGAAAGAGAAAATGTTATGAAGGATCCCAATGCTCTTATTCCTGCAGCATTTGTTTCATTCAAAACCCGATGGGGTGCAGCTGTTTGTGCTCAAACTCAACAAACTAGTAATCCAACCATTTGGCTGACAGAATGGGCTCCTGAGCCTCGTGATGTCTACTGGGAAAATCTTGCAATTCCATATTTTGATCTCAATATTCGAAGATTACTCATGTCTGTCTCTTTATTTTTCCTTACTTTCTTCTTCATGATACCAATAGCATTGGTCCAATCTCTAGCCAACATTGAGTCGATTGAGAAGGTCCTTCCTTTCTTGAAGCATATAATTGAAAAGCCATCTGTCAAGTCTGTTATTCAAGGATTTCTGCCAGGGCTAGCACTGAAGATATTTCTTGCAATGCTTCCAAAAATTCTCATGGCAATGTCCAAAATAGAAGGTTTTTCATCACTTTCATCTTTGGAACGGAGGTCAGCTTCCAAATATTACTTGTTTGTTCTCGTCAATGTGTTCCTTGGAAGCGTTATCACTGGAACCGCATTTCAGCAACTTCAGCAGTTTATTGATCAGCCCTCTACAAAGTTCACAAAAACGGTTGGCAGTACAATCCCCATGAAAGCCACATTCTTCATCACATACATAATGATCGATGGATGGGCTGGAATAGCTGCAGAGATCCTTAGGTTAGCTCCGTTAATTACGTTCCACTTGAAGAACACATTCTTGGTGAAGACTGAGCAAGACAGACAGAGTGCTATGGATCCTGGTAGCTTGGAATTTGCTACATCTGAACCTCGTATCCAGTTATATTTCATGCTAGGGCATGTCTATGCTCCAGTCACACCTTTACTCCTCCCCTTCATTGTAGTCTTCTTTGCTTTTTCCTACCTGGTCTTTCGGCACCAGATTATCAATGTGTATAACCAGCAATATGAGAGTGGAGCATCCTTTTGGCCTGATGTCCACCGTCGAGTAATCATAGGCTTGATTATATCTCAGTTTCTTCTGATGGGGTTGTTAAGTACAAGAGGCGCCAATAAGTCGACCCTGTTGCTTATTGCACAACCTGTCTTGACAATCTGGTTCCACAGATATTGCAAAGGGCGCTTCGAATCTGCGTTTGTAAAATTCCCACTAGAGGATGCCATGGTGAAGGATACACTTGAACGAGCTGTTGAACCAAACTTGAACCTGAGACTTTATCTTCAGGATGCTTACGTGCACCCAGTTTTCAAGGGCAACGAGTTGGAAAAACCAGTAATCATTGATGACGAAGAGGAAAATCCACTTATTCCGACAAAAAGAAGTTCTCGTCGGAGTAGCAAGCCTCAATCTGATAATGGAGCCGGTAGTGCTAGCAGTTCCTCAGGTGCAGCCGTCATTTGA 2301 0.4263 MATVADIATSAAINLLSAVAFLVAFAVLRLQPFNDRVYFPKWYLKGIRGSPTSSSSLVKKFVNLDFRTYIRFLNWMPAALHMPEPEVIDHAGLDSAIYIRIYILGIKIFAPITVLAFIVLVPINWTGKTLEAPGAKELTFSSIDKISISNIPFGSQRFWAHIVMSYVFSTWTCYSLYKEYRIIATMRLRFLASERRRPDQFTVLVRNVPPDPDESVSEHIEHFFCVNHPDHYLMHHVVYNANKLASIVAKKKKLQNWYIYYQNKYERDPSKRPTTRTGIMGIIGTKVDALDHYTAAIDQLSLQEAVERENVMKDPNALIPAAFVSFKTRWGAAVCAQTQQTSNPTIWLTEWAPEPRDVYWENLAIPYFDLNIRRLLMSVSLFFLTFFFMIPIALVQSLANIESIEKVLPFLKHIIEKPSVKSVIQGFLPGLALKIFLAMLPKILMAMSKIEGFSSLSSLERRSASKYYLFVLVNVFLGSVITGTAFQQLQQFIDQPSTKFTKTVGSTIPMKATFFITYIMIDGWAGIAAEILRLAPLITFHLKNTFLVKTEQDRQSAMDPGSLEFATSEPRIQLYFMLGHVYAPVTPLLLPFIVVFFAFSYLVFRHQIINVYNQQYESGASFWPDVHRRVIIGLIISQFLLMGLLSTRGANKSTLLLIAQPVLTIWFHRYCKGRFESAFVKFPLEDAMVKDTLERAVEPNLNLRLYLQDAYVHPVFKGNELEKPVIIDDEEENPLIPTKRSSRRSSKPQSDNGAGSASSSSGAAVI* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1155 766 PANTHER OS05G0393800 PROTEIN 3 745 - -
Lja1g1155 766 Pfam Calcium-dependent channel, 7TM region, putative phosphate 373 645 IPR003864 GO:0016020
Lja1g1155 766 Pfam Cytosolic domain of 10TM putative phosphate transporter 200 362 IPR027815 -
Lja1g1155 766 MobiDBLite consensus disorder prediction 728 766 - -
Lja1g1155 766 MobiDBLite consensus disorder prediction 739 766 - -
Lja1g1155 766 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 3 745 IPR045122 GO:0005227
Lja1g1155 766 Pfam Late exocytosis, associated with Golgi transport 7 179 IPR032880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1155 Lja-Chr1 11856227 11862508 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1155 K21989 - gmx:100776693 1301.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1155 1 11856227 11862508 Lja1g1155 1 11856227 11862508 ECH