Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1151 ATGACTCTGAATCCCCTGAACCTTGATCGGAGGTTGTTCCCTCCGACGAACTTCGTGTACGACGCTGATGATGTTCCATTTGGCACGCTCTGGTGGTTCGTTTACGCAGGAATTTCATGCTTCCTTGTCCTCTTCGCAGGGATCATGTCTGGTCTCACCCTAGGGTTGATGTCACTCAGCCTCGTTGACCTTGAGATTCTCCAACGAAGTGGCTCCTCCACTGAGAAGAAACAAGCTGCTGCTATTTTGCCTGTTGTTATTAAACAGCACCAGTTGCTTGTTACCTTGCTTCTTTGTAATGCTTGTGCCATGGAGGCACTTCCACTTTACCTTGATAAAATATTTCATCCTGTTGTAGCAGTATTGCTATCAGTAACTTTTGTTCTATGTTTTGGGGAGATTATCCCACAAGCTATATGCACAAGATATGGGCTCTATGTTGGTGCGAATTTTGTGGGGCTTGTACGCGTCCTGATGTTCATCTGTTATCCGATTGCTTACCCTATTGGAAAGGTTCTGGATGTTTTACTTGGACACCAGGATGATCTGTTTCGGCGAGCACAATTGAAAGCCCTTGTTTCAATCCATGGCCAAGAGGCTGGTAAAGGAGGTGAACTTACACATGATGAGACAACAATTATCAGTGGAGCACTGGATCTCACTGAGAAGACTGCAGGGGAAGCCATGACACCAATTGAATCTACTTTTTCCTTGGATGTTGATTCCAAATTAGACTGGGAAGCAATTGGGAAAATTCTTGCACGAGGGCATAGTCGTGTTCCTGTATACAATGGAAATCCCAAAAACATAATTGGCCTCTTACTAGTAAAAAACCTTCTCACTATAAGAGCTGAAACAGAGACTCCAGTTAGTGCTGTTTCCATCCGGAGAATTCCTAGGGTTCCAGCAGACATGCCTTTATATGATATACTCAATGAGTTTCAAAAAGGAAGCAGCCATATGGCAGCTGTAGTTAAGGTTGCAAGAGAGAGTAAGAACCCTCAGGAAGCTTGTTACATGGGAAAATCCAAGAATGAAAAATTCACCAAACATAGTTCTAAGCTAACTGTGCCGTTACTAGCCAGGTCTTCTGAGAAATCAGACAATGTTGCAGATATTGGCAAGGCTCCTCCCAATCATGATGCAGACAAACAATGCCAAAAAAATAGTACCGCAACAAATGGTGACCACCGCTTTCATGATTATGACGAAGATGGGGAAGTTATTGGCATCATAACCTTGGAGGACGTTTTTGAAGAACTCTTGCAGAATACGGGTTGCAGCTGTGGCAGCTGCTTCATTTGTGGCACGAGTTCCATTGGTCCAAAAGTTGAATCACAACTCACAAGCTTGAGGGTAATAAACCATATAGGTGAAAGTTTCACAAGGTTTGTGGAGGATGATTCACATTTGAGGAAAGTTTCAGGATCTCTAGATTGA 1440 0.4347 MTLNPLNLDRRLFPPTNFVYDADDVPFGTLWWFVYAGISCFLVLFAGIMSGLTLGLMSLSLVDLEILQRSGSSTEKKQAAAILPVVIKQHQLLVTLLLCNACAMEALPLYLDKIFHPVVAVLLSVTFVLCFGEIIPQAICTRYGLYVGANFVGLVRVLMFICYPIAYPIGKVLDVLLGHQDDLFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAGEAMTPIESTFSLDVDSKLDWEAIGKILARGHSRVPVYNGNPKNIIGLLLVKNLLTIRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSSEKSDNVADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEELLQNTGCSCGSCFICGTSSIGPKVESQLTSLRVINHIGESFTRFVEDDSHLRKVSGSLD* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1151 479 PANTHER BNAC05G01850D PROTEIN 17 425 - -
Lja1g1151 479 CDD CBS_pair_CorC_HlyC_assoc 224 325 IPR044751 -
Lja1g1151 479 Pfam Cyclin M transmembrane N-terminal domain 38 209 IPR002550 -
Lja1g1151 479 Gene3D - 210 342 IPR046342 -
Lja1g1151 479 ProSiteProfiles CBS domain profile. 229 290 IPR000644 -
Lja1g1151 479 MobiDBLite consensus disorder prediction 366 399 - -
Lja1g1151 479 SUPERFAMILY CBS-domain pair 214 424 IPR046342 -
Lja1g1151 479 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 17 425 IPR045095 GO:0010960
Lja1g1151 479 ProSiteProfiles CNNM transmembrane domain profile. 28 210 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1151 Lja-Chr1 11809873 11815495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1151 K16302 - gmx:100777230 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1151 1 11809873 11815495 Lja1g1151 1 11809873 11815495 ECH