Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1142 ATGACCCACTTGGATTTCCTCAAGAAATTCAAGCGCTATAGCCCTCTAGACCCTTCTCTGAGTTTCTTCTTCGCTGCCCTTCTCTTCATTGCCTGCTTCTTCTACCTTGATTATGGTGGGTTTCGCTCTAGGGGCACCACTCTCCTCGCCGTGCACTTCTCCTCCTCCCCCGTGCCGTTCTCTTCATCTTCTTCATCTGTTCAGTTTCTGGGTCAAGATGGTGATGGGTGTGATGTGTTTGATGGGAACTGGGTTTGGGATGAGACTTACCCACTTTACCATTCTGCTAACTGTTCCTTCTTGGATCAAGGCTTTCGCTGCTCTGAGAATGGTAGGCCTGATGCCTTTTATACCAAGTGGCGATGGCAGCCCAAGGATTGCAACTTGCCAAGATTTGAAGCAAGGAATATGTTGGAAAAGCTACGGAACAAGCGGCTAGTTTTTGTTGGTGATTCAATTGGAAGGAATCAATGGGAATCACTCCTTTGTATGCTCTCTTCTGCCATTAAAAACAAGAGTGCTGTCTACGAGGTTAATGGGAGCCCAATCACGAAACACATGGGCGTCTTGGCGTTCAAGTTTGAAGATTTCAACTGCACCGTTGAATACTACAGGTCACCATTTCTAGTAGTACAAGGACGGCCTCCACCTGGAGCACCTAAAGAGGTAAAAATGACTCTGAGAGTGGATCGCATGGACTGGATATCTCATCACTGGAGAGATGCAGATGTGTTGGTTCTCAATGCTGGACACTGGTGGAATTATGAGAAGACTCTGAAACTGGGCTGTTACTTCCAATTAGGGGTGGAAGTGAAGATGAATATGACTACAGAGGATGCGTTCAGAAAATCAGTTCAGACTGTAGTTGATTGGATTGCTAGTGAAGTAAACACAAACAAAACTTATGTCCTTTTCCGAACTTATGCTCCTGTGCACTTCAGGGGTGGTAATTGGAACACCGGTGGTGGTTGTAACTTGGAAACGCTACCTGATCTTGGCTCCATCCCTGAAGTCTCTGACATGCATTTCAGAACTGTCTTTGATGTCTTATCAGAGCACACGAGTAAATCTAGAGTTTTGAAGTTAGACTTGCTTAATGTCACCCAAATGTCGTCACGCAGGAAAGATGGCCATGCATCTATTTACTACCTTGGGCAAGACAAGGGCCCAGCCTCTATGCAGCGGCAAGATTGCAGCCATTGGTGCCTCCCCGGTGTTCCCGATTCATGGAATGAGATTCTTTACGCACTTCTTCTTAAGCGGGAGGCCTTTCGCGAACGGACTACGGCTTTTCGCGAACGGAATACAACAAGAGTTTCTCAAGTTTCAGTATAA 1335 0.4637 MTHLDFLKKFKRYSPLDPSLSFFFAALLFIACFFYLDYGGFRSRGTTLLAVHFSSSPVPFSSSSSSVQFLGQDGDGCDVFDGNWVWDETYPLYHSANCSFLDQGFRCSENGRPDAFYTKWRWQPKDCNLPRFEARNMLEKLRNKRLVFVGDSIGRNQWESLLCMLSSAIKNKSAVYEVNGSPITKHMGVLAFKFEDFNCTVEYYRSPFLVVQGRPPPGAPKEVKMTLRVDRMDWISHHWRDADVLVLNAGHWWNYEKTLKLGCYFQLGVEVKMNMTTEDAFRKSVQTVVDWIASEVNTNKTYVLFRTYAPVHFRGGNWNTGGGCNLETLPDLGSIPEVSDMHFRTVFDVLSEHTSKSRVLKLDLLNVTQMSSRRKDGHASIYYLGQDKGPASMQRQDCSHWCLPGVPDSWNEILYALLLKREAFRERTTAFRERNTTRVSQVSV* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1142 444 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 13 426 - -
Lja1g1142 444 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 129 416 IPR026057 GO:0016740
Lja1g1142 444 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 13 426 IPR029962 GO:0016413
Lja1g1142 444 Pfam PMR5 N terminal Domain 76 128 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1142 Lja-Chr1 11712386 11716687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1142 - - gmx:100779356 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1142 1 11712386 11716687 Lja1g1142 1 11712386 11716687 ECH