Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1141 ATGAACCTCCCTCCAATACACTTGTCAACTGTGATTGGTTTGTTGTTTTGCCTGTTGTGGAGTGTTGCTGATAGTGTTCCCAACACCAACATCACCAACGTTCTCTGCAACGGTGTCACCTACACCTCAGGGGACCCTTTTGCAATTAGCTTAAGCTATGTCCTTAGCGACTTAGAAACACAAACTCCAGCTCATAAGAATTATGACTACCACAACATTTCACCTTATCCTAATGCATTTGCCTATGGTCATGCTTCTTGCAACCTCAATCTCACGTCCTCTGACTGTAAAACCTGTCTTGGAGCTGCTATACAGGACATATATGACACATGTCGGACGCCACGGGTAGGCGCTCGCTCGGTGCTCCGTGATTGTTCACTCAGGTACGAGCAATACCCGTTTGACGATTAG 411 0.4647 MNLPPIHLSTVIGLLFCLLWSVADSVPNTNITNVLCNGVTYTSGDPFAISLSYVLSDLETQTPAHKNYDYHNISPYPNAFAYGHASCNLNLTSSDCKTCLGAAIQDIYDTCRTPRVGARSVLRDCSLRYEQYPFDD* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1141 136 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 135 - -
Lja1g1141 136 Gene3D - 28 134 IPR038408 -
Lja1g1141 136 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 135 - -
Lja1g1141 136 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Lja1g1141 136 Pfam Salt stress response/antifungal 36 132 IPR002902 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1141 82 134 Receptor kinase-like Gene Family AT4G23130 39.623 1.58e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1141 - - gmx:102664018 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1141 1 11711015 11711786 Lja1g1141 1 11711015 11711786 ECH