Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1135 ATGTCTTCATCAAGCTTGTGCCAAGGCCTGCAATCTTGTCTCGAGCCACGAGTGATCGAACCACGTGTGCTGAGGCTCAAATTGACTCCACCCTCCACCACCACCACCACCACCAACAACAAGGCTTCATCTTCATCCACCTCAGTCCAAGAAAACCCCCTCACCAACCATGAATGTGATGACAAAAAGGACACAAACATAGTAGAAAACATGGACGAACGTGGCTGGAGTTTCCTTCAAGCTCTCACAAAACCCACTTCTTCTAATTGTAACAAAGAAGAGGATGACAAAGTCTATGTCCACCCCACTGTGAAGCGTTCCTCTTCATTGCTCAGTGAAAAGAGCTTAGAAATGTGCACTGAAAGCCTTGGAAGCGAGACTGGTAGCAATGCTGGTGAAAGCTGCGATGACATTTCTCTGTTCTCACTGGAAAATAACATCACTACTACAACTACTACTACTACTACTACTACTAATGGAACTGACTCAAATTGGGTATCTAGAAGAGTGAACAAGGCTTGCAACTTTCCACCACCACTGACTTCAATCACTGATTTTGGTGGGGTTCGTGTGAGGCCTCATCGTGAAGGTGGTAGGCTCATTTTGGAAGCTGTTGCTTCACCTTCACCACGCCCTTGTTTTCATGCAGAGCGTGGTGATGGCAGGCTCAGGCTGCACCTGTTTGAGGAGGAGGGTCTTTCTGATGATGGTGATGATGATGAAGTTGTTGATGAGGAAGAAGAAGTTGTTGAGGAATGGAGTGATGATGATGATATTAATGATGATGAAAGTGATGATGAAGTGGAAGAAGAAAGTGAAACTGAAATTGAAACAGAGAAGGAAGAAGAAGAAGAAGAAGAGTGTGGTGTTGAGAACGTGGAGGATGAGATGGGAGTGAAAAAGTTCAACAGACCAAGCAGGTGCAAGGAAAGTGGGAATAGAGACATTTTTGGTGATGGCTACTTTGAGCTTCCCTCTCTGTCTCTCTGTCTCTGA 996 0.4528 MSSSSLCQGLQSCLEPRVIEPRVLRLKLTPPSTTTTTTNNKASSSSTSVQENPLTNHECDDKKDTNIVENMDERGWSFLQALTKPTSSNCNKEEDDKVYVHPTVKRSSSLLSEKSLEMCTESLGSETGSNAGESCDDISLFSLENNITTTTTTTTTTTNGTDSNWVSRRVNKACNFPPPLTSITDFGGVRVRPHREGGRLILEAVASPSPRPCFHAERGDGRLRLHLFEEEGLSDDGDDDEVVDEEEEVVEEWSDDDDINDDESDDEVEEESETEIETEKEEEEEEECGVENVEDEMGVKKFNRPSRCKESGNRDIFGDGYFELPSLSLCL* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1135 331 MobiDBLite consensus disorder prediction 28 54 - -
Lja1g1135 331 Coils Coil 276 296 - -
Lja1g1135 331 MobiDBLite consensus disorder prediction 231 296 - -
Lja1g1135 331 PANTHER DUF3049 FAMILY PROTEIN 1 314 - -
Lja1g1135 331 MobiDBLite consensus disorder prediction 28 61 - -
Lja1g1135 331 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 1 314 IPR021410 -
Lja1g1135 331 MobiDBLite consensus disorder prediction 232 292 - -
Lja1g1135 331 Pfam Fantastic Four meristem regulator 175 227 IPR046431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1135 Lja-Chr1 11650323 11651788 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1135 - - gmx:102660963 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1135 1 11650323 11651788 Lja5g1986 5 25708931 25709767 PCT