Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1130 ATGGGGACTCTGGCTCTTGAAACCGAGGATGTAAGTTCAGACATATACCTTTCATTGGGGCTCAAAGGATTGGATAAAGGAGTAGGAGTACCACGAGTTTTGTCTCTTCTCTCTTCACTTCTTGAGAGATCAGTTCAGAGAAATGAAATGCTATTGGAGTCGAACCATATAAAAGATGTTGTTACAGTATTTCATGGTTTAAGAGCACCTGCTCTGAGTGTTCATAAATACATTGATCGTATCTTCAAGTACTCAGGTTGCAGCCCATCCTGTTTTGTGTTGGCACACATATATGTGGATAGATTTCTTCAGCATACAGAGATCAAATTGACTTCTCTTAATGTACACCGGCTTCTGATCACAAGCATTATGCTAGCAGCGAAATTCATGGATGACGCGTTCTTCAACAATGCTTACTATGCTAAAGTTGGAGGAGTAAGCACGTCTGAATTAAACAGGTTGGAGATGAGCTTTCTGTTCGGCATAGATTTTAGACTTCAGGTTAGTGTAGACAAGTTTCAAAGATATTGTTGGCAATTGGAGAAAGAATCTGCAGATATACTCCAAATTGAAAGGCCAATGCAGGCTTGTAGGATTAAAGAAAGCTGGGATGATTCTACGTGTGCTTCCACAATTGCAAGATGA 645 0.4016 MGTLALETEDVSSDIYLSLGLKGLDKGVGVPRVLSLLSSLLERSVQRNEMLLESNHIKDVVTVFHGLRAPALSVHKYIDRIFKYSGCSPSCFVLAHIYVDRFLQHTEIKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYAKVGGVSTSELNRLEMSFLFGIDFRLQVSVDKFQRYCWQLEKESADILQIERPMQACRIKESWDDSTCASTIAR* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1130 214 Gene3D - 27 210 - -
Lja1g1130 214 PANTHER CYCLIN 26 204 - -
Lja1g1130 214 SUPERFAMILY Cyclin-like 76 166 IPR036915 -
Lja1g1130 214 CDD CYCLIN 75 159 IPR013763 -
Lja1g1130 214 Pfam Cyclin 60 166 IPR013922 GO:0000079|GO:0019901
Lja1g1130 214 PANTHER UNCHARACTERIZED 26 204 IPR013922 GO:0000079|GO:0019901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1130 Lja-Chr1 11618542 11621146 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1130 - - gmx:100805926 353.599