Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1122 ATGGTGTCCCTGCGCTTCCCTTTCTTGTCTTCTCTACCCCAACCACCACCTCAACCCTCACGCCCCTTCTCCACACTCGCTGCAGCAGCAGCGGCTGCCGCTGGAGCCACCGCAGCCTTCGTCTCCATCTCCTCCTCCGACCGTGACAGGAATGCCATGAGTTCGCTCTTCTCTTCCCACCACTCCTTGCCTCTCTGGGGTTCCCTCAGTTTGGCTGACAATGCGGCTCCCGTTGTCGAGTCGAGAACCGGATCGTCTTTCCCTTCAGCTCTAGACTCTTCTCAGAAGCTCTGTGGTATTGGGTTGCGCAGGAAATGCATTTTTGGACTGAAGAATATTGATGTGTATGCATTTGGTGTTTATGCTGATGATGATGACATAAAGAGATGTCTTTCTGAGAAATATGGGAACTTGTCTGCTTCCCAATTGAAGGGTAATAAGGAGTTCAGTGAAGATCTACTGGAAAATGATATATCCATGACAGTTAGACTTCAAATTGTTTATGGCAAATTGAGCATTCGTTCAGTACGTAGTGCATTTGAAGAGTCTGTAGGAAGCAGGTTGCAAAAGTATGGAGGATCAGACAATAAAGAATTGCTTCAGAGGTTCACCTCACAGTTTAAAGATGAATTCAAAATACCACGTGGATCTGTAATTCACCTTTCAAGAGAGAAGGGCCACATTCTTCGCACATCAATTGATGGACAGGAAGTGGGAAGCATCCAGAGTAAACTCCTATGTAGGTCACTCCTAGATTTATATGTTGGGGAGGAACCGTTTGATAAACAAGCCAAAGAAGACATTGAGCTCAACATTGCTTCTTACCTCCAGAAATAG 837 0.4624 MVSLRFPFLSSLPQPPPQPSRPFSTLAAAAAAAAGATAAFVSISSSDRDRNAMSSLFSSHHSLPLWGSLSLADNAAPVVESRTGSSFPSALDSSQKLCGIGLRRKCIFGLKNIDVYAFGVYADDDDIKRCLSEKYGNLSASQLKGNKEFSEDLLENDISMTVRLQIVYGKLSIRSVRSAFEESVGSRLQKYGGSDNKELLQRFTSQFKDEFKIPRGSVIHLSREKGHILRTSIDGQEVGSIQSKLLCRSLLDLYVGEEPFDKQAKEDIELNIASYLQK* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1122 278 SUPERFAMILY Chalcone isomerase 82 277 IPR036298 GO:0016872
Lja1g1122 278 Gene3D - 126 269 IPR016089 -
Lja1g1122 278 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 278 IPR044228 -
Lja1g1122 278 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 278 - -
Lja1g1122 278 Pfam Chalcone isomerase like 96 268 IPR016087 GO:0016872
Lja1g1122 278 Gene3D - 79 254 IPR016088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1122 Lja-Chr1 11398749 11401650 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1122 - - gmx:100785266 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1122 1 11398749 11401650 Lja1g1122 1 11398749 11401650 ECH