Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1121 ATGTCTTCTCACTTCACCACCCACTACCAACACCACCTTCCCTCTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAGCATTCCCCTTTTCCCTCTTCTATTTCTCTTTCTCATCACTTCTCCAAATCCTCTAAGGGTGTGGTGTCATCAGAGGCTAAAGACAAACAAGAGAAAAGATGCAGAGCAATATCAAAATCACGAACTCAAGAATATGCAGAAGTATTTCAGAATAGTCTAACAACTTTAAAGTTGCATGATATTGATGTGGAGGATGACACACATGAGGAGCAAGCTATTGGGGTTTCTGTGACAAATGAGATTCAAAAGAGAGTGGAGGCTATCAAATCAATACTGGGACTAATGGAAGATGGAGAGATAACCATATCTGCTTATGACACAGCTTGGGTTGCTCTTGTTGAAGATGTTCATGGAAGTGGTACCCCTCAATTTCCTTCAAGTCTTGAATGGATTGCAAAAAATCAACTTGCTGATGGTTCATGGGGTGATAGTGAATTGTTCTCAGCACATGATCGAATCATTAACACGTTGGCTTGTGTTATTGCATTGAGAACATGGAATATGCACCCTGAAAAGTGTGAGAAAGGAATGGCATTTTTCAGAGAAAAACTTAGCAAGCTTGAGGATGAGAATGCTGAACATATGCCAATTGGGTTTGAGGTTGCTTTCCCTTCACTTCTGGACATAGCTCGTGGTTTGAACATTGAAGTGCCTGATGATTCCCCAATATTGAAGGACATATTTGCCAAGAGAGATGAAAAACTCACAAGAATACCAGGAGAGATGATGCATAAAGTGCCCACAACTCTGCTTCATAGCTTGGAGGGTATGTCAGACTTAGATTGGAAACAACTTCTAAAACTGCAATCTGAAGATGGATCATTCTTGTTTTCTCCATCCTCCACCGCCTTTGCACTCATGCAAACCAAGGATGAAAATTGCCTCAAATACTTGAATAATGCTGTCACCAAGTTCAATGGGGGAGTTCCAAACGTGTATCCGGTGGATTTGTTTGAACATATTTGGGTGGTTGATAGGCTAGAACGCCTAGGAATATCAAGGTATTTTCAGCAAGAGATCAAGGACTGTATGAGTTATGTTTACAGATATTGGACTGAAAAGGGCATTTGTTGGGCAAGAAATTCAAATGTTCAGGACATTGATGACACAGCAATGGGTTTCAGGTTACTAAGATTACATGGCCACCAAGTTTCAGCAGATGTGTTCAAGCACTTTGAGAGGAATGGTGAATTCTTCTGCTTTGCTGGGCAGAGCACGCAAGCAGTGACAGGAATGTTCAATCTGTATAGGGCCACTCAAGTAGTGTTTCCAGAGGAGAAGATTCTTGAAAATGCAAAGCAATTCTCTGCAAAGTTTTTGAGGGAAAAGAGAGCAGCAAATGAGCTAATAGATAAATGGATCATAATGAAGAATTTGCCTGAAGAGGTGGGTTACGCATTGGATGTGCCATGGTATGCAAACTTACCACGAGTGGAGACAAGATTCTACATTGATCAATATGGTGGTGAGAGTGACGTGTGGATTGGCAAAACTCTTTATAGGATGGCTTATGTGAACAACAACAATTATCTGGAGCTTGCTAAATTAGACTACAACTATTGCCAAGCATTGCATCTAGCTGAATGGGGGGAAATTCAAAAGTGGTACTCAGAATCAAGATTGGGAGAGTTTGGATTGAGCAGAAGGAATCTTTTGTTGGCCTATTTTCTGGCAGCAGCTAGCATCTATGAGCCTGAGAGGTCCCATGAGAGGCTTGCATGGGCCAAAGCCACAGCATTGCTTGAGACATTAGCATCCTATGTTTGTGATGCAGAAATGAGAAAAGATTTTGTGGAAAATTTCAGTGATTGCATCAACAAGCGTGACTACTCCATTGGCTGGAGGTTGAACAGGAGCAAAACAGGACATGGACTGGCTGAGACTTTGGTTGCAACCATAGACCAGATCTCCTGGGACATACTTGTGTCTCATGGTCATGAAATTGGACATGATATGCATCACACTTGGAAAAAGTGGCTATCAAGTTGGGAAAGTGGAGGAGGGGACAATTGTGAAGGACAGGCAGAGCTTTTGGTGCAAACAATCAAACTAACCGCGGGCCATTGGATTTCTGAGGAGCAAATGTTGAGTCCACAATACCAGCGTCTCCTTCAACTCACCAACACACTCTGTCATACACTCAGTTGCTATCAAAAGGACAAGGAATCCAAGAACGACAACATCACAATTCCAGAAGTAGAGTCAGAAATGCAAGAACTCGTGCAATTGGTGTTCCAAAAATCTCCAAATGGCATTGATTTCAATATCAAGAATACTTTCTTGATAGTGGCAAAGAGTTTCTACTACACAACATTCTGTGATTCACGGACAATCAACTTCCATATTGCCAAAGTTCTCTTTGATGAAGTAGTTTAA 2478 0.4144 MSSHFTTHYQHHLPSFSSSSSSSSSSSSSSSSSKHSPFPSSISLSHHFSKSSKGVVSSEAKDKQEKRCRAISKSRTQEYAEVFQNSLTTLKLHDIDVEDDTHEEQAIGVSVTNEIQKRVEAIKSILGLMEDGEITISAYDTAWVALVEDVHGSGTPQFPSSLEWIAKNQLADGSWGDSELFSAHDRIINTLACVIALRTWNMHPEKCEKGMAFFREKLSKLEDENAEHMPIGFEVAFPSLLDIARGLNIEVPDDSPILKDIFAKRDEKLTRIPGEMMHKVPTTLLHSLEGMSDLDWKQLLKLQSEDGSFLFSPSSTAFALMQTKDENCLKYLNNAVTKFNGGVPNVYPVDLFEHIWVVDRLERLGISRYFQQEIKDCMSYVYRYWTEKGICWARNSNVQDIDDTAMGFRLLRLHGHQVSADVFKHFERNGEFFCFAGQSTQAVTGMFNLYRATQVVFPEEKILENAKQFSAKFLREKRAANELIDKWIIMKNLPEEVGYALDVPWYANLPRVETRFYIDQYGGESDVWIGKTLYRMAYVNNNNYLELAKLDYNYCQALHLAEWGEIQKWYSESRLGEFGLSRRNLLLAYFLAAASIYEPERSHERLAWAKATALLETLASYVCDAEMRKDFVENFSDCINKRDYSIGWRLNRSKTGHGLAETLVATIDQISWDILVSHGHEIGHDMHHTWKKWLSSWESGGGDNCEGQAELLVQTIKLTAGHWISEEQMLSPQYQRLLQLTNTLCHTLSCYQKDKESKNDNITIPEVESEMQELVQLVFQKSPNGIDFNIKNTFLIVAKSFYYTTFCDSRTINFHIAKVLFDEVV* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1121 825 Pfam Terpene synthase family, metal binding domain 545 697 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lja1g1121 825 Gene3D Farnesyl Diphosphate Synthase 555 825 IPR008949 -
Lja1g1121 825 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 110 535 - -
Lja1g1121 825 SFLD Terpene Cyclase Like 1 N-term 110 535 - -
Lja1g1121 825 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 99 821 - -
Lja1g1121 825 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 138 216 IPR008930 -
Lja1g1121 825 Pfam Terpene synthase, N-terminal domain 295 501 IPR001906 GO:0010333|GO:0016829
Lja1g1121 825 MobiDBLite consensus disorder prediction 1 55 - -
Lja1g1121 825 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 99 821 - -
Lja1g1121 825 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 306 526 IPR008930 -
Lja1g1121 825 MobiDBLite consensus disorder prediction 56 71 - -
Lja1g1121 825 SUPERFAMILY Terpenoid synthases 540 795 IPR008949 -
Lja1g1121 825 Gene3D - 138 350 - -
Lja1g1121 825 CDD Terpene_cyclase_plant_C1 306 822 IPR044814 GO:0010333|GO:0016102
Lja1g1121 825 Gene3D - 121 553 IPR036965 GO:0010333|GO:0016829
Lja1g1121 825 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1121 Lja-Chr1 11379759 11390840 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1121 K04120 - gmx:100784193 1311.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1121 1 11379759 11390840 Lja1g1121 1 11379759 11390840 ECH