Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1120 ATGGCGAAGCGACAGTGTCCGTCAGAAAACCCTAGACCGGAGCAGGTGGAGAATCTTCTCAACGCGTTCCTCTCCCTCTCGGATTTACCGTCTCTCTCCCTCGATCTCTCCTTCGAGAATCTTCTCCAATCAATGCCCGCTCCTCACGACTCATCCGATCTCATCGATCGCGCTCTCAAGATGGGCTCGCTCCTCCTCCACGCCGCCAACCACTCCTCCCGCAAACGCGCTTCCCACCATAATTCACTCTCCTGGCCCCTCTCTCACGACCTCACCATCAAGGTCTTCTCGATGCTTGATACCCAGAGCCTGTGCTATGCATCGGCTTCTTGTTCATTCTTTAGCAAGTGTGCCAAAGATCCTATGTGCTATGCAAATCTTGATTTGACTACACCTGTTCCCAAGGTTAACAATGCAGTGGTTGCAACGATGATTCAGCGAGCTGGAAAGGCACTGAGGTCTCTTAAGCTTGGTGTTGTCCCTGGTGCCACTACTTCACCTGGATGTTGTCAACCATTGATTTGTGCCGTTAGGAATGCTATTGTAGACGTTTCTAACATTTCATGGATTGATAAGAGATCTCGTCAAGGGAGAGACCCATCATCCATTCTTACAAGATGCTGTTTAAGCCCTTTAAGTGGGGACGGTGGTGCTCCGGGGGCTCTTTTGAGAAAGTTGCACCTGTACAATATTGAGAGAATGGATAATGCATCCCTTGGTGGGGCATTGTTAGCATGCCCTTCTCTCCTTGATCTGGAAATTGTTGGGCTCCATGTTGAACTGAGGCAAACATTAATGTCAGTAAGTGCAAACTGCCACTTGATCGAGCGTTTGTGTTTTGAGTCTTCTAAAGCAGGTAGAGATGATAGCTTGAAAGCGCAAACGTGTTCTGAGCTGGTAAACAATTGTCCTCATCTAGCTTCTTTATCTCTTCGAGGGTTTAAGCTACATGATTGTAAAGTTCGCATACTGGTTAAGGGATTTCGGAAACTGAAATATGTTGACTTTTCAACATCCTATTCAATCACGGGAAATTTCTTAAGAAACCTTGGAAGCTGCAATGGTGGGAACTTGCTTGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGACGGAAGCTACCAGGTTGTTGACAGCGATTCTTGCAGGAGATTTCAAATTGCTTGTACATCTGGACATATCCAATAGGGAAGGCTTAGCATCTGAGGTTGACTGGTATCGGAGGTGCTACAACCCTAGTACTATGCCTATAAAGCAGGTTTTGGAAGCAAGGCCTGATATGCATTTGGTGGCTGAATATCCATCAGAAGGAAGTTACATGGAATTTGATGCTGATGATAGTGATCCAAGTGTGCCATTACACTCTAGCAGCCACACATCAGATGGATCAAGTTTTATGAGTACATCTGAAGGCAGCTATAATAGTGATCAGGGTAGTGGCAATGAGGATGCTCCAGATGCCAACTATGTGGTTTATGAGGAAAGCTCTGATGAGATTGACTTTCTGGCCGTGTAG 1521 0.4615 MAKRQCPSENPRPEQVENLLNAFLSLSDLPSLSLDLSFENLLQSMPAPHDSSDLIDRALKMGSLLLHAANHSSRKRASHHNSLSWPLSHDLTIKVFSMLDTQSLCYASASCSFFSKCAKDPMCYANLDLTTPVPKVNNAVVATMIQRAGKALRSLKLGVVPGATTSPGCCQPLICAVRNAIVDVSNISWIDKRSRQGRDPSSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNASLGGALLACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLCFESSKAGRDDSLKAQTCSELVNNCPHLASLSLRGFKLHDCKVRILVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNLLEVLILRDCMHLKETEATRLLTAILAGDFKLLVHLDISNREGLASEVDWYRRCYNPSTMPIKQVLEARPDMHLVAEYPSEGSYMEFDADDSDPSVPLHSSSHTSDGSSFMSTSEGSYNSDQGSGNEDAPDANYVVYEESSDEIDFLAV* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1120 506 MobiDBLite consensus disorder prediction 452 484 - -
Lja1g1120 506 PANTHER F-BOX SKIP17-LIKE PROTEIN 16 449 - -
Lja1g1120 506 Gene3D Ribonuclease Inhibitor 80 404 IPR032675 -
Lja1g1120 506 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 16 449 - -
Lja1g1120 506 SUPERFAMILY F-box domain 87 133 IPR036047 GO:0005515
Lja1g1120 506 MobiDBLite consensus disorder prediction 443 492 - -
Lja1g1120 506 SUPERFAMILY RNI-like 218 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1120 Lja-Chr1 11354365 11362525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1120 K10268 - gmx:100786317 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1120 1 11354365 11362525 Lja1g1120 1 11354365 11362525 ECH