Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1102 ATGTCGTCGTCATTGCTAGCCGATTTCCTCCGTCAAGGTGGCGGCAGAGCCATCATCGACGGCGGTCTCGCCACGGAGCTCGAACACCACGGCGCCGACCTCAACGATCCCCTTTGGAGCGCCAAATGCCTCCTCTCCTCCCCTCACCTCATTCGCCAGGTTCACGTTGATTATCTGGAAAACGGTGCGGACATTATAATCACTGCATCGTATCAAGCTACCATTCAGGGTTTTAAAGCCAAGGGGTTTTCGGACGAAGAAGGTGAAGCCTTGCTTAGAAAAAGTGTTGAAATCGCTCGCGAGGCTCGCGATGTGTACTATGAAAGATGTGCTGCTTCCTCCTCTGGGGATGCTGCTGCTGCTGATGATGGTAGAATCCTCAAACAACGCCCTATCCTTGTTGCTGCGTCGGTCGGGAGCTATGGAGCTTATTTGGCTGATGGATCAGAGTACAGTGGGAATTATGGTGATGCTGTCAAGTTGGAAACTCTTAAAGATTTTCATCGGAGAAGAGTTCAAGTTTTAGCTGATGCAGGTGCTGACCTGCTTGCATTTGAAACAATACCAAATAAGCTTGAAGCTCAGGCATATGCAGAGCTTCTGGAAGAAGAGGACATAAAAATTCCAGCGTGGTTTTGTTTTAACTCTAAGGATGGAATTAATGTTGTTAGTGGTGATTCTGTAGTAGAATGCAGCTCCATTGCTGAATCATGCAACAAAGTCGTTGCTGTTGGAATCAACTGTACCCCACCTAGATTCATTCATGGTCTGATAGTTGTGATTAAGAAGGTGACTACAAAACCAATTGTTATATATCCAAACAGCGGGGAAACTTATGATGGTGAGATAAAGGAGTGGGTGCAAAATACAGGTGTTACAGATGAAGATTTTGTATCGTATGTAGATAAATGGTGCGAGTTAGGGGCTTCCCTTATAGGTGGATGTTGCAGGACGACCCCAGCTACTATTAGAGGGATATACAAGACGCTCGCTAATAGTCAATCTGCTACTCTTTCCACAGAGTGA 1026 0.463 MSSSLLADFLRQGGGRAIIDGGLATELEHHGADLNDPLWSAKCLLSSPHLIRQVHVDYLENGADIIITASYQATIQGFKAKGFSDEEGEALLRKSVEIAREARDVYYERCAASSSGDAAAADDGRILKQRPILVAASVGSYGAYLADGSEYSGNYGDAVKLETLKDFHRRRVQVLADAGADLLAFETIPNKLEAQAYAELLEEEDIKIPAWFCFNSKDGINVVSGDSVVECSSIAESCNKVVAVGINCTPPRFIHGLIVVIKKVTTKPIVIYPNSGETYDGEIKEWVQNTGVTDEDFVSYVDKWCELGASLIGGCCRTTPATIRGIYKTLANSQSATLSTE* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1102 341 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 336 - -
Lja1g1102 341 Pfam Homocysteine S-methyltransferase 18 329 IPR003726 -
Lja1g1102 341 SUPERFAMILY Homocysteine S-methyltransferase 13 333 IPR036589 -
Lja1g1102 341 PIRSF BHMT 9 339 IPR017226 GO:0008168|GO:0008270|GO:0009086
Lja1g1102 341 ProSiteProfiles Homocysteine-binding domain profile. 5 330 IPR003726 -
Lja1g1102 341 PANTHER ZGC:172121 2 336 - -
Lja1g1102 341 Gene3D - 9 328 IPR036589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1102 Lja-Chr1 10998633 11003937 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1102 K00547 - gmx:100790567 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1102 1 10998633 11003937 Lja1g1102 1 10998633 11003937 ECH