Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1083 ATGGAAACAAGTGTTGTGAGGCAGAACATGATTTCAATTTCAACACCAACTTCACCTCTCTGGAAGCTGATCAAACACAAACCACAACATCGACCTTGTGTGGTTGCAGTGCTCAGAAATCCTTTAAGTGACATTGCAGGAGCAGCAAGAAAAACTATAGGAGAATCTGATTCTCCTATGAAAACTAATATCTACAAGGATAACTGGTTTGATCGCTTAGCAATAAACCATCTATCAAAAAGTGTTCAAGAAGCCACAGGAGTGATTAACCATAAGAGTGGGTATGAGGGTCTGGTTGAAGCAGCTAATGTGGCTAAACATAAATTTAGTCCTGTTCAGCAGCAAGAGGTTGTCATTCAAGCTCTTGACAAAGCTTTTCCAAAGCCAATACTAGATTTGATAAAGACACTGCTACCACCATCTAAATTTGCAAGGGAATATTATGCCGTCTTCACCACTTTGTTCTTTGCTTGGTTGGTCGGACCATCCGAGGTTAGAGAATCGGAGGTCAACGGAAGAAGAGAAAAAAATGTAGTCTACGTCAAAAAATGCAGGTTTTTAGAGGCGACAAACTGTGTAGGAATGTGTACTAATATCTGCAAAATGCCATCTCAATCGTTTATCAAGGACTCTCTTGGTATGTCATTCAACATGGTCCCAAATTTTGATGACATGAGTTGTGAGATGATATTTGGGCAGGACCCTCCAGCATTAGCTGATGATCCAGCACTGAAGCAACCTTGCTACAAACTATGTAAGGCATATAAACAGCATGGACCGAGCTGCCACGATTAA 795 0.4088 METSVVRQNMISISTPTSPLWKLIKHKPQHRPCVVAVLRNPLSDIAGAARKTIGESDSPMKTNIYKDNWFDRLAINHLSKSVQEATGVINHKSGYEGLVEAANVAKHKFSPVQQQEVVIQALDKAFPKPILDLIKTLLPPSKFAREYYAVFTTLFFAWLVGPSEVRESEVNGRREKNVVYVKKCRFLEATNCVGMCTNICKMPSQSFIKDSLGMSFNMVPNFDDMSCEMIFGQDPPALADDPALKQPCYKLCKAYKQHGPSCHD* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1083 264 Pfam Beta-carotene isomerase D27-like, C-terminal 158 238 IPR025114 GO:0005506
Lja1g1083 264 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 1 259 - -
Lja1g1083 264 PANTHER BETA-CAROTENE ISOMERASE D27 1 259 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1083 Lja-Chr1 10785487 10789907 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1083 K17911 - gmx:100813404 355.14