Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1054 ATGAATTCCGATTCCGACTCCGATCCTCTTCCTACGACGGACGACACGGCGGCGATTCTAATCCCCGGCCTCCCAAACGACGTCGCAGCCTCGATCCTCTCTCGTGTTCCCTATTCCCACCACGCTCGCCTCAAATCCACGTGCAAGGCATGGAAAACGGTGCTCTCATCGAACCATTTTCTCCACTCCCTCAAACGCAACCACCTCCTCTGCATCTTCCCGCAAGACCCTTCCACCGCCACCTCCTACCTCTTCGACCCGTCCGAGGTCGCGTGGTGCCCCCTCCCTCCCATGCCCTGCAACCCCAATGTCTACGGCAGATGCAACTTCGCCGCCGTGGCCTTCGGCGCACACATCTACATCCTCGGCGGTTCGCTTTTCGACGCGCGCTCTTTCCCCATTAACCGCCCCTCCGCTTCGTCGTCCACTTTCCGGTTCAATTTCTGTGACTTTTCATGGGAGCACCGTGCGCCTATGCTCTCGCCGCGTGGAAGCTTCGCCTGCGCGGCGCTTCCGTCGACCGGGCATATTCTCGTTGCCGGTGGTGGGTCCCGCCATGTTATTTTCGGTGCTGCCGGGTCGCGTATCCGGTTTGCGGAGCGGTATGATGTGGAGAGGGACTGCTGGGTTGCGGTGGATTCTCTGCCGGACTTTCGGGCGGGGTGTGTTGGGTTTGTGGGTGGGGATGGGAGGGAGTTTTGGGTGGTTGGTGGGTACAGTGCGTCGATGACGGTTTCCGGGGTGTTTCCAGTGGATGAGTATTGTAGGGATGCTGTGGTGATGGGGTTGGAGGATGGGGCGTGGAGGGAGGTTGGAGATATGTGGGGTGATGGTGAAAGGATTAGGGCTGGGAAGATTGTTGTGGTTGATGATCATGGCTGCCCCGCGGTTTTCATGCTTGAAATGAATGAGATTTTGAGATATGACATGTCTTCAAATCGATGGCTATTCGAATCTCGCGTGCCAAGAAGAGCTCCTCACAGTTCGCCATTTGGTTTTGTTGCAGTCGAGCATGAGCTGTATATATTGACACACTCATACGATGATGATTACTTTAGAACACGAAGGTCCAGAAACTCTAAGAGGACTGGCACCATGATTTTTCAAATCTATAACCCGAAGAAGAAGACATGGAGAACTCTTGTCACAAAATCACCTTTCACATACCCTGTAGATATTAAGAATTCCGTATTGAGCTCAATCTGTCTATGA 1212 0.5429 MNSDSDSDPLPTTDDTAAILIPGLPNDVAASILSRVPYSHHARLKSTCKAWKTVLSSNHFLHSLKRNHLLCIFPQDPSTATSYLFDPSEVAWCPLPPMPCNPNVYGRCNFAAVAFGAHIYILGGSLFDARSFPINRPSASSSTFRFNFCDFSWEHRAPMLSPRGSFACAALPSTGHILVAGGGSRHVIFGAAGSRIRFAERYDVERDCWVAVDSLPDFRAGCVGFVGGDGREFWVVGGYSASMTVSGVFPVDEYCRDAVVMGLEDGAWREVGDMWGDGERIRAGKIVVVDDHGCPAVFMLEMNEILRYDMSSNRWLFESRVPRRAPHSSPFGFVAVEHELYILTHSYDDDYFRTRRSRNSKRTGTMIFQIYNPKKKTWRTLVTKSPFTYPVDIKNSVLSSICL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1054 403 SUPERFAMILY Kelch motif 73 381 IPR015915 GO:0005515
Lja1g1054 403 Pfam Kelch motif 107 159 IPR006652 GO:0005515
Lja1g1054 403 Gene3D - 58 391 IPR015915 GO:0005515
Lja1g1054 403 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 9 403 - -
Lja1g1054 403 SUPERFAMILY F-box domain 21 102 IPR036047 GO:0005515
Lja1g1054 403 Pfam F-box-like 21 60 IPR001810 GO:0005515
Lja1g1054 403 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Lja1g1054 403 SMART fbox_2 24 64 IPR001810 GO:0005515
Lja1g1054 403 SMART kelc_smart 176 229 IPR006652 GO:0005515
Lja1g1054 403 SMART kelc_smart 118 173 IPR006652 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1054 - - gmx:100820159 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1054 1 10524388 10529172 Lja1g1054 1 10524388 10529172 ECH