Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1016 ATGAACCTCTTCTCTAAGAAACCCACCGCCAAAGAGGCTCTTCGTGAGAGTAAACGGGAAATGGCTAACGCTACCAGAGGTATAGAGAGGGAAATTGGATCATTACAATTGGAAGAAAAAAAGCTAGTTGCTGAGATAAAGAGAACTGCTAAAACAGGAAATGAGGCAGCGACTAAAACTCTAGCCCGCCAGCTTGTCAGGCTTAGGCAGCAGATTGCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATTGCGACTCACACGCAGGCAATGCATGCCCATTCTTCTGTTGCTGTTGGTATGAAAGGCGCTAGTAAGGCAATGGCAGCAATGAATAAGCAAATGGATCCGGCAAAGCAAGCCAAAGTTATGCTGGAATTCCAGAAACAATCAACGCAGATGGATATGACTACTGAAATGATGTCAGATGCCATAGATGATGCAATAGACAATGATGAAGCTGAAGAGGAGACTGATGAGCTGACAAACCAGGTTCTTGATGAAATTGGTGTGGATGTTGCCTCACAGTTATCAACAGCTCCCAAAGGGAGAGTTTCAACAAAGAATACTGAAAACGTCAGCAGCTCTGGCATTGATGACCTTGAGAAGCGTTTGGCGGCTCTTAGAAACCCATAA 639 0.4491 MNLFSKKPTAKEALRESKREMANATRGIEREIGSLQLEEKKLVAEIKRTAKTGNEAATKTLARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGASKAMAAMNKQMDPAKQAKVMLEFQKQSTQMDMTTEMMSDAIDDAIDNDEAEEETDELTNQVLDEIGVDVASQLSTAPKGRVSTKNTENVSSSGIDDLEKRLAALRNP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1016 212 MobiDBLite consensus disorder prediction 180 197 - -
Lja1g1016 212 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 212 - -
Lja1g1016 212 Gene3D - 4 181 - -
Lja1g1016 212 Pfam Snf7 16 185 IPR005024 GO:0007034
Lja1g1016 212 Coils Coil 58 78 - -
Lja1g1016 212 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g1016 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 212 IPR005024 GO:0007034
Lja1g1016 212 MobiDBLite consensus disorder prediction 175 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1016 Lja-Chr1 10091499 10094823 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1016 K12192 - gmx:100306343 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1016 1 10091499 10094823 Lja1g1016 1 10091499 10094823 ECH