Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1013 ATGGCGATGGCGGGGTTGTATCGGCGCCTTCTTCCTTCACCCCCTGCCGTCGATTTCGCTTCCTCTCAGGGCAAGCAACTTTTTCTTGAAGCGGTTCAAAATGGAACCATGGAAAGCTTTTACAGGTTGGTTTCATATTTCCAAACGCAATCAGAGCCTGCATTTTGTGGCCTCGCGAGCTTGTCCATGGTCCTCAATGCTCTTGCCATTGATCCTGGCAGAAAATGGAAAGGACCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGCGAACCTCTGGACAAGATCAAAGCTAGAGGCATCTCATTTGGAAAGCTTGTATGCTTGGCTCACTGTGCTGGAGCGAAAGTTGAAGCCTTTCATGCAAGCCATAGCAGTATCGATCATTTTCGTAAATATGTCATGAAATGTTCAACTTCTGATGATTGTCATGTTATCTCATCATACCACAGAGAGGCTCTCAAACAAACAGGAACTGGTCACTTTTCTCCTATTGGTGGCTATCATGCTGGAAAGGACATGGCACTTATTTTGGATGTTGCACGTTTCAAGTATCCTCCCCATTGGATCCCACTTACACATCTTTGGGAAGGCATGAATTATGTTGATGAATCCACTGGAAAAACCAGAGGGTTCATGCTTATATCAAGGCCTCACAGGGAACCTGGCATGCTTTATACTCTGAGCTGCAAACACGAGAGTTGGAATAGTATTGCCAAATTCCTAATTGATGATATCCCTTTTCTATTAACATCAGAGGATGTGAAAGACATTTGTAAGGTTCTTTCAGTTATCGTCACGTCGCTGCCATCTAATTTTGAAGAATTCATCAAATGGGTTGCAGAGATCAGGAGAGGAGAGGATGGTTCTCCAAGCTTAAGTGTAGAGGAGAAAGCACGACTTTCTGTCAAGGAAGAGATATTGAAACAGGTGCAGAGGACAGGACTTTTCAAACATGTAGCCTCGTTTTTGTCACATTCTTGCAGCGGACACACACCAACTTCAGGCGATAGAGACACCTTTCCTGTCATTGCGGCAAGTGTTTGTTGTCAAGGAGCGGAAATTTTAGGTGGGAAAATTAGCTCGTCAGCGGAGTATTGCTGTCGTGAAACATGCATGAAATGCTGGAAAGCGGAAGATGACAAGCCAATAAGAATGGTTTGTGGCACTGTGGTAAATGGCAATACTGAACAAGGGGTTGATGTGCTGATTCCTTCATCATGTGGGAAATTATCTTGCACTTGCTCTAGCACAACCAAGTCCATAAGGAAGCACCCAGCAAGCACTGATGTGTTAACTGTGCTTCTATTGTCCTTACCAACTTCAACCTGGGCCGGTATCGCAGATGAGAAGCTTTTGAGCGAAATTCATGACCTTGTTTCAATTGAAAACCTTCCTGCTTTGCTTCAAGAAGAGGTTTTGCACTTGAGACGTCAGCTACACATTCTCAAGAGATGTCAAGAGGGAAAGGTAGATGAGGATCTTGGTGTACCTTTGTCTTAG 1506 0.4429 MAMAGLYRRLLPSPPAVDFASSQGKQLFLEAVQNGTMESFYRLVSYFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLDKIKARGISFGKLVCLAHCAGAKVEAFHASHSSIDHFRKYVMKCSTSDDCHVISSYHREALKQTGTGHFSPIGGYHAGKDMALILDVARFKYPPHWIPLTHLWEGMNYVDESTGKTRGFMLISRPHREPGMLYTLSCKHESWNSIAKFLIDDIPFLLTSEDVKDICKVLSVIVTSLPSNFEEFIKWVAEIRRGEDGSPSLSVEEKARLSVKEEILKQVQRTGLFKHVASFLSHSCSGHTPTSGDRDTFPVIAASVCCQGAEILGGKISSSAEYCCRETCMKCWKAEDDKPIRMVCGTVVNGNTEQGVDVLIPSSCGKLSCTCSSTTKSIRKHPASTDVLTVLLLSLPTSTWAGIADEKLLSEIHDLVSIENLPALLQEEVLHLRRQLHILKRCQEGKVDEDLGVPLS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1013 501 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lja1g1013 501 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Lja1g1013 501 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 493 IPR040409 GO:0016756|GO:0046872|GO:0046938
Lja1g1013 501 Gene3D - 16 220 IPR038156 -
Lja1g1013 501 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lja1g1013 501 Pfam Domain of unknown function (DUF1984) 231 481 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lja1g1013 501 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1013 Lja-Chr1 10074836 10078580 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1013 K05941 - gmx:547627 843.188