Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1012 ATGGCGAGCGTAAGTCTATACCGCAGAGTCCTCCCTTCTCCACCTGCGATCGATTTCGCTTCGCAGGAAGGCAAGAAGATCTTTGTTGAAGCTCTTGGTCAAGGAACCATGGAGGGTTTCTTCAAGCTAATATCATTCTACCAGACACAATCAGAGCCTGCATATTGTGGTCTCGCCACGCTTTCTGTTGTCCTCAATGCCCTTGCCATTGACCCTGGTAGGAAATGGAAAGGGCCTTGGAGATGGTTTGATGATTCCATGTTGGATTGTTGTGAGCCCTTGGAGAAGGTTAAAGTTCAAGGCATTACGTTTGGAAAAGTTGCGTGCTTGGCTCGATGTAATGGGGCTAAAGTTGAAGCTTTTCGATCCAATGAGAGCACTGTCAGTGATTTTCGCAACCGTGTGATTTCGTGTTGTTCTTCTGAGGATCGTCATGCGATTGTGTCTTACCATAGGTCAGGGTTAAAGCAGACTGGAGAGGGCCATTTTTCACCTCTTGGAGGATATCATGCTGAAAGGGACATGGTACTGATATTGGACGTCACTCGTTACAAATATCCTCCTCACTGGGTTCCCGTTACCCTTCTCTGGAATGCCATGAATACCATTGATCGAGCTACTGGACTTCAAAGGGGGTACATGATTATTTCAAAGCTTAACAGGGCACCATCAATACTTTATACTCTGAGTTGTAGACATGAAGGTTGGAGCAGTGTGGCCAAATTTCTAACTGAGAATGTCCCTCTCCTTCTAAAGTCAGAGGATCTAAAAGACATCCAGGAAGTACTCTCTGTTGTATTTAAATCTCCTCCTAGTGAATTGAGAGAGTTCATCACATGGATTGCTGAAGTTCGCAGGCAAGAAGATGGGAATCTCACTTTGAGTGAGGAAGAGAAAGGAAGGCTAGTGATCAAGGCAGAAATACTGGAAAAGATTCGGACAGCTGGGCTCTTCAAACACGTGACCAGTTGGTTGGATTCACAACGGTCACGCTGCAGTACTATTGCAAACCTTCAAGACAAAGATATGCTACCAGAACTCGCTGCACGTGTTTGTTGCCAAGGGGCGTGCCTTTTGACTGGTTGTTGTTTGTCAGGTGGAAAATGCTGTTGCCAAATAGATGTGAAACATCTGAATGTTGATAGTAAAAATCTAGCAACAACATTTGTTTCTGGAACGTTTACAACTGGAAGCAGTAGTGAACAAGGAGTTGATGTGTTGGTCCCCTTGTGTCAAAGAGGGCCAGAAGGTCACTACATTGCAATGCATCCTTCTACTGCAGATGTCTTAACAGTGCTTTTGTTGGCCTTGCCCTTGCATACATGGTCCGGCATTAAAGAAGAAAAGCTGCGTGCGGAAGTTACAAGCCTTGTGACAACTGAAGACCTCCCTTCCTTACTTCAAGAAGAGGTGTTATTCTTGCGAGAGCAACTCCATTTTCTCATGACTGAGATTGGTTATCCTTCTCACTGA 1473 0.4508 MASVSLYRRVLPSPPAIDFASQEGKKIFVEALGQGTMEGFFKLISFYQTQSEPAYCGLATLSVVLNALAIDPGRKWKGPWRWFDDSMLDCCEPLEKVKVQGITFGKVACLARCNGAKVEAFRSNESTVSDFRNRVISCCSSEDRHAIVSYHRSGLKQTGEGHFSPLGGYHAERDMVLILDVTRYKYPPHWVPVTLLWNAMNTIDRATGLQRGYMIISKLNRAPSILYTLSCRHEGWSSVAKFLTENVPLLLKSEDLKDIQEVLSVVFKSPPSELREFITWIAEVRRQEDGNLTLSEEEKGRLVIKAEILEKIRTAGLFKHVTSWLDSQRSRCSTIANLQDKDMLPELAARVCCQGACLLTGCCLSGGKCCCQIDVKHLNVDSKNLATTFVSGTFTTGSSSEQGVDVLVPLCQRGPEGHYIAMHPSTADVLTVLLLALPLHTWSGIKEEKLRAEVTSLVTTEDLPSLLQEEVLFLREQLHFLMTEIGYPSH* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1012 490 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Lja1g1012 490 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lja1g1012 490 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 483 IPR040409 GO:0016756|GO:0046872|GO:0046938
Lja1g1012 490 Pfam Domain of unknown function (DUF1984) 231 478 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lja1g1012 490 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 483 - -
Lja1g1012 490 Gene3D - 16 221 IPR038156 -
Lja1g1012 490 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1012 Lja-Chr1 10068875 10072991 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1012 K05941 - gmx:100782042 778.474