Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1009 ATGGAAAGAGAAGAGAGCTGTGAGACTCATCCTCTGTTGAAAGGAGGAAGGAGAAAAGAGAAAGGTTACAGCCATGGGTTATCAAGCAGCCAGATGCATGTTATAGCTGCCATATGTGAGGCTCTCTTTCCTTCCCAGCCATTGGACTCCCAAAACAATCAAAGCTCAGTAGACAAAGCCCTCTCAGCTTTCTACACAGCCTCTGGTTCCCAGGCCCCACTTCCTGATGAGGCTGCAGAGCTCTTGTTCAAGTTCAATAGATCTTTCCCAGAAGCATTGTCCTTGGTGAGCTGGGTGCTGCTGATACTGTCATTCAGATTGGGGACGCTGTTGCTTTGTGGAACTCTTTGCTTGGACTGGAGGTGGCCTTTCATTCACAAGTTCTCTGAGATTCCCTTGGAGAAAAGAGAAGAAATTCTCAAGAGATGGTCAAGGGAAAAGTGTTGGATACCTCTGCGGCTAGTGTTTGTGCTGACCAAACTTGTTTGCTTCTACAACTTGTTCTCAAGGGCTGATGTGAATGGACATAATCCCATATGGAAAGCAATTGGATACCAGGTGGACACCAGGGAAAAATTGACGCAAAAGAAGAGGCCCCTCCAAGAGGGACTAATAGAGACCATGTATGAAACTGATTCTACTCTGATCCAATCCCTCACTGAAAAAGGCCTTGAAGTCACTGAAGATCTAGAGCAGAACATGTACAAGATCAAATGTGATGCTGTCATTGTTGGTTCTGGTTGCGGTGGAGGAGTTGCAGCTGCAGTTCTTGCGAACTCTGGTCACAAAGTGATCATCCTAGAGAAAGGAGAGTATTTTGTTTCCCATGATTACTCTTCCCTTGAAGGTCCATCCATGAATGAGCTCTATGAATCAGGTGGAATCTTGCCAAGTCTTGATGGCAAGATGATGATCTTGGCTGGCTCAACACTTGGTGGAGGCTCTGCTATCAACTGGTCTGCATGCATCAGAACACCTGATTCTGTTCTGAGGGAGTGGTCTGAAAAACACAAAATCCCACTTTTTGCAAGCCCTGATTATCAATCTGCCATGGACACAGTTTGCAGAAGGATTGGTGTGACTGAGAATTGCAACAAGGAAAGTTTCCAGAATCAAATTCTTCGACAAGGGTGCGCGAAAATCGGTTTCAAAGTTGAGCCAGTTGCAATAAATTCCTCAGCAGATCACTACTGTGGTTCATGCTGTTATGGTTGTAGAACAGGAGATAAAAAGGGGACTGAATCAACTTGGTTGGTTGATGCTGTGGGAAATGGCGCAGTGATTCTTACCGGCTGCAAAGCTGAGAAATTGAATTTTACACTGAAAGATGGAGATAATGGAACCAAGAGAAAGACATGTTCAGGTGTGATTGCTTCAGCAACTTGGAGGAGTAAAGTAACAAAAAAACTCCAAATAGAATCCAAGGTAACAATTTCAGCATGTGGTTCTCTCTCCACACCTCCTCTAATGATTTCAAGTGGCCTAAAAAATCCTAACATTGGAAAAAACCTTCACCTCCACCCATGTCAATTTGCTTGGGGTTACTTCCCAGAGGACATGACAAACTTTAGTGGTAACAACTATGAGGGAGGGATCATAACTTCTATCCACAAGGTGTTTGAAGAGGATTCCACTTCCACCCCAAGAATCATTATAGAAGCACCTGCTCTAGGACCTGGATCATTTTCAGCCTTGGTTCCTTGGGTCTCAGGGCTTGATGTAAAAGAGAGAATGGTGAAGTATGCAAGAACTGCTAACCTTTTTGCATTGGTGAGAGACCATGGTTCAGGAGAAGTAAAAGCTGAAGGCAGAATTTCTTACAAACTTGACAAAATAGACAGAGAAAGTCTTCAAACTGGGTTGAGAAAGGCCTTGAGGATTTTGGTTGCAGCAGGTGCTGTGGAAGTGGGAACTTACAGGAGTGATGGCCAGAGAATAAAGTGTAGAGGGATCAAGGAGAGTGATTTGGAAGAGTTTCTTGACAGTGTGAGAGTTGTTGGGGGTCCAAGTTCAAGGAATGAAGTGTGGACAGTGTTTACTAGTGCACACCAGATGACAAGTTGTAGAATGAGTGCTACTGAAGAAGAAGGTGCAGTTGATGAGAATGGAGAGAGTTGGGAAGCAAAAGGGTTATATGTGTGTGATGGAAGTGTTTTACCAAGTGCAGTTGGTGTTAACCCCATGATAACTATACAATCTACAGCATACTGCATTGCTAGTAACATTGCAGAATCACTGAAGAAACAAAACTAG 2253 0.4399 MEREESCETHPLLKGGRRKEKGYSHGLSSSQMHVIAAICEALFPSQPLDSQNNQSSVDKALSAFYTASGSQAPLPDEAAELLFKFNRSFPEALSLVSWVLLILSFRLGTLLLCGTLCLDWRWPFIHKFSEIPLEKREEILKRWSREKCWIPLRLVFVLTKLVCFYNLFSRADVNGHNPIWKAIGYQVDTREKLTQKKRPLQEGLIETMYETDSTLIQSLTEKGLEVTEDLEQNMYKIKCDAVIVGSGCGGGVAAAVLANSGHKVIILEKGEYFVSHDYSSLEGPSMNELYESGGILPSLDGKMMILAGSTLGGGSAINWSACIRTPDSVLREWSEKHKIPLFASPDYQSAMDTVCRRIGVTENCNKESFQNQILRQGCAKIGFKVEPVAINSSADHYCGSCCYGCRTGDKKGTESTWLVDAVGNGAVILTGCKAEKLNFTLKDGDNGTKRKTCSGVIASATWRSKVTKKLQIESKVTISACGSLSTPPLMISSGLKNPNIGKNLHLHPCQFAWGYFPEDMTNFSGNNYEGGIITSIHKVFEEDSTSTPRIIIEAPALGPGSFSALVPWVSGLDVKERMVKYARTANLFALVRDHGSGEVKAEGRISYKLDKIDRESLQTGLRKALRILVAAGAVEVGTYRSDGQRIKCRGIKESDLEEFLDSVRVVGGPSSRNEVWTVFTSAHQMTSCRMSATEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMITIQSTAYCIASNIAESLKKQN* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1009 750 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g1009 750 Pfam GMC oxidoreductase 604 737 IPR007867 GO:0016614
Lja1g1009 750 SUPERFAMILY FAD/NAD(P)-binding domain 237 748 IPR036188 -
Lja1g1009 750 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 8 749 - -
Lja1g1009 750 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 8 749 - -
Lja1g1009 750 PIRSF Lg_Ch_AO 13 750 IPR012400 GO:0046577
Lja1g1009 750 Gene3D - 224 538 IPR036188 -
Lja1g1009 750 Pfam GMC oxidoreductase 240 509 IPR000172 GO:0016614|GO:0050660
Lja1g1009 750 Gene3D - 664 750 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1009 Lja-Chr1 10023242 10027473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1009 10 749 Acyl Lipid Metabolism Gene Families AT4G28570 57.620 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1009 K17756 - gmx:100808951 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1009 1 10023242 10027473 Lja1g1009 1 10023242 10027473 ECH