Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1005 ATGTCCAACAAACCGCTGCTGCTATGCTTCCTAACCGTCCTCGCCGCCGTCGCCGGACGCGGAGCATCGTCGGACCTCGACTACTCGAAGCTCTCCGGCATTATCATCCCCGGCTTCGCCTCCACTCAGCTCCGAGCATGGTCGATTCTTGACTGCCCTTACTCTCCTCTCGATTTCAACCCTCTCGATTTGGTCTGGTTGGACACCACCAAACTTCTTTCTGCGGTGAATTGCTGGCTTAAGTGCATGGTGCTGGATCCTTACAACCAGACGGATCACCCTGATTGCAAGTCTCGCCCTGATAGTGGTCTTTCTGGTATTACAGAACTTGATCCTGGTTATATAACAGGACCTCTTTCGTCGGTATGGAAAGAATGGATTAAGTGGTGCATTGAATTTGGGATAGAAGCTAATGCAATAATGGCTGTCCCATATGATTGGAGACTGTCACCGTCAATGCTTGAAGAAAGAGATCTTTACTTCCATAAGCTAAAATTGACATTTGAAACTGCTTATAAACTTCGAGGTGGCCCCTCTTTAGTTTTTGCCCATTCATTGGGTAATCACGTTTTTCGTTATTTCTTGGAGTGGTTGAAGCTAGAGATAGCACCAAAACATTATTTCGAATGGCTGGATCAACATATTCACGCATATTTTGCTGTTGGAGCTCCCCTTTTGGGTGCAACTGAAACCGTCGAAGCAACACTCTCTGGTTTCACATTTGGTCTTCCTATATCTGAGGGAACAGCTCGATTGATGTTCAACTCATTTGGTTCATCATTGTGGATGATGCCTTTTTCCAAGTACTGCAGAACAGATAATAAATATTGGAAACATTTTGCCGGAGAAAGGCATGCAGGTCATCATACATATCGTTGTGATGAGCGAGAATTTCATTCAAACTTATCTGGATGGCCAACAAAGATAATCAACATTGAAATCCCCTCAAGTCGTGGATTTGATGCATATCCTTCATTTTCAGAGATACCTGATGCCAACTTGTCCAGCATGGAATGTGGACTACCTACTCAATTATCTTTCTCAGCTCGTGAAATAGCTGATGGCTCCTTTTTCAAGGCAATTGAAGATTATGACCCAGATAGCAAGAGGCTTTTGTACCAGTTAGAGAAATCATATCTTAGTGATCCTGTTCTTAATCCACTTACACCTTGGGACCGGCCACCAATTAAAAATGTCTTCTGCATTTATGGCACTGATTCAAAGACAAAGGTTGGTTACTACTTTGCCCCTAGTGGCAAGCCTTACCCTGACAACTGGATCATTACGGATGTCGTTTATGAGTTCGAAGGATCTCTAATCTCAAGGTCAGGGAATCTGATTGAAGGGGACCCAACAGCCATAAGTGGTGATGGGACGGTACCATACACCTCCCTTTCCTGGTGCAAGAACTGGCTTGGACCAAAGGTGAACATAACAAGAGCTCCTCAGTCCGAGCACGATGGCTCAGATGTACAGATTGAATTGAATGTGGAACATCACCATGAAGAGGATCTTGTTCCAAATATGACAAGATCGCCCAGGGTTAAGTACATAACATATTATGAAGATTCTGAAAGTATTCCTGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATTGTTAGATCACCAGTGCTAATGAGGGAATTATGGCTTGAGATGTGGCATGATGTCCATCCTGATGCAGAATCAAAGTTTGTCACAAAAGTTAAGCGTGGACCTTTAAGAGAAGAGGACTGTTATTGGGATTATGGGAAAGCTCGCTGTGCATGGCCAGAGTATTGTGAATATAGGTATATTTTTGGTGATGTTCACTTGGGACAAAGCTGCAGGTTGAGATATACGTCGTCTGATTTGTTGTTGCATTATTTATAA 1890 0.4365 MSNKPLLLCFLTVLAAVAGRGASSDLDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMVLDPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIMAVPYDWRLSPSMLEERDLYFHKLKLTFETAYKLRGGPSLVFAHSLGNHVFRYFLEWLKLEIAPKHYFEWLDQHIHAYFAVGAPLLGATETVEATLSGFTFGLPISEGTARLMFNSFGSSLWMMPFSKYCRTDNKYWKHFAGERHAGHHTYRCDEREFHSNLSGWPTKIINIEIPSSRGFDAYPSFSEIPDANLSSMECGLPTQLSFSAREIADGSFFKAIEDYDPDSKRLLYQLEKSYLSDPVLNPLTPWDRPPIKNVFCIYGTDSKTKVGYYFAPSGKPYPDNWIITDVVYEFEGSLISRSGNLIEGDPTAISGDGTVPYTSLSWCKNWLGPKVNITRAPQSEHDGSDVQIELNVEHHHEEDLVPNMTRSPRVKYITYYEDSESIPGKRTAVWELDKANHRNIVRSPVLMRELWLEMWHDVHPDAESKFVTKVKRGPLREEDCYWDYGKARCAWPEYCEYRYIFGDVHLGQSCRLRYTSSDLLLHYL* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1005 629 Pfam Lecithin:cholesterol acyltransferase 63 499 IPR003386 GO:0006629|GO:0008374
Lja1g1005 629 Gene3D alpha/beta hydrolase 90 250 IPR029058 -
Lja1g1005 629 SUPERFAMILY alpha/beta-Hydrolases 161 486 IPR029058 -
Lja1g1005 629 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 22 612 - -
Lja1g1005 629 PANTHER BNAA09G50730D PROTEIN 22 612 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1005 2 629 Acyl Lipid Metabolism Gene Families AT1G04010 75.235 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1005 - - gmx:100806466 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1005 1 9994475 10005607 Lja1g1005 1 9994475 10005607 ECH