Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0985 ATGCCATGGAGCCGCACCATCACCATCTTCTCCACTGATATAAACCAAGCACCCTTCATTCGGTTCCCTACTTCGAAATTCCACTTCTCAAATTTCCCCCAAAAACCGAAGAAGCAGGGTTTCAATCTTCTTCACTGCAACGAAGCGGTTAATCTCCATTTCAGTATGGGAGATAGTGAGACAGTAGTTGCTGATGCATCTGCGGCGGAGGCGTATGCTGCTTCTGCTTCTGCTGGACATGCTGACACCGTCATGGATCCTGTTCCTGAGGCTGGTGCTGCTACTGGAGAAGCTTCTCAGGCTAATTCTGCTTATGGATATGGTGAGGGGAATGTGTATGCTAGGGATCCTAATTCCGGCCAGTTGGGTGGAACCGGTGATTCCAAGCAAGCTGCTGGAGTTGTCGATGCTAATGAGGCTGGAAATGCGGCTGCGGAGAATAGTGTAGTTCCTGAATACAACTCAACTGCAAATGGCAGTGTAGTGACAAATGCTGCGGGACTTGAAAACGGGAACGCGGTGGACAATGTTGATGGGTCAGCTGATGAGAAACAGCTTGCAGATGGTTATGCAGCTGCCTTGTCTGCTGAAGAAGATCGACTGTGGAATATTGTTAGTGCTAATTCTTTAGATTTTACTGCTTGGACTGCCTTGATTGAAGAGACTGAGAAGGTGGCAGAGGACAACATCTTGAAGATTAGAAGAGTCTATGATGCTTTTTTAGGAGAATTTCCTTTGTGTTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACGTCTTGGCGCTGTTGATAAAGTTGTTGAAGTGTATGAGCGTGCTGTTCAAGGAGTTACATACTCAGTGGATATGTGGTTGCATTATTGCATATTTGCTATAAGCACATATGGGGATCCAGACACAGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCTCTTTGGGATAAATACATAGAATATGAATATATGCAGCAAGACTGGGCCCGCCTTGCCATGATCTACACCAGAATATTGGAGAATCCAAATCAGCAGCTGGATCGGTATTTTAACAGCTTCAAGGAGTTAGCTGGCAGTCGACCATTGTCAGAATTACGGACTGCTGATGAAGCTGCTGCAGTGACAGGTGTTGCTTCAGAGGCTACTGACCAACCTCTTGAGGGAGAGGACCGTCCTGATGGTGCAGAGATTTCTCCTAAACCTGTAAGTGCTGGCTTAACAGAGGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGCTGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCCATCAGGAGGCCCTACTTTCATGTACGGCCCCTCAATATTGGAGAGCTTGAGAACTGGCATAACTACCTGGACTTTATAGAAAGAGAAGGTGACTTAAGCAAGATTGTCAAGTTGTATGAGAGATGTGTGATTGCATGTGCCAATTATCCTGAGTACTGGATACGCTATGTTTTATGTATGGAAGCTAGTGCAAACATGGATCTTGCAAATAATGTGCTTGCTCGGGCAACCCAAGTATTTGTGAAGAGACAACCAGAGATACATCTATTTTGTGCTCGGTTCAAGGAGCAGGCGGGAGATATAGCTGGTGCTAGAGCTGCGTATCAACTAGTGCATACTGAAACTTCTCCTGGTCTTCTTGAAGCAATAATAAAACACGGCAATATGGAATATCGACTGGGTAAGTTGGAGGATGCATTCTCGTTGTATGAACAGGCTATTGCCATTGAGAAAGGAAAAGAACATTCACAAACATTGCCAATGTTGTTTGCTCAGTATTCTCGATTTGTTTATTTGGCTTCTGAGAATGCAGAAAAAGCAAGAGAGATTCTAGTTGGGGGGCTTGAAAATGTTTCTTTGTCTAAGCCACTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAACCACAGCCTAAGCGAGTTGATATGGACTTTCTGGAGTCATTGGTTGTCAAATTCATAGTGCCCAATCCAGAGAGCCCTACTGTAGCAAGTGCTGCAGAGCGTGAGGAACTCTCCAGCATTTTTTTGGAGTTTTTAAATCTCTTTGGAGATGTTCAATCTATCAAGAGGGGCGAGGATAGGCATGCCAAACTTTTCTTGCCACATAGGAGCATGTCGGAGTTGAAGAAACGTAGTGCAGAAGATTTCTTAGCTTCCAACAAAACTAAAGTCTCAAGAACTTATTCTGTTCAGTCACCTGCTCAATCTGTGATGGGTGCATATCCCAATGCACCGAACCAATGGACTAACTATGGAGCACAACCTCAAACTTGGCCAGCAGTCCCACAAATACAAGGACAACAATGGCCTGCTGGCTACAACCAGCAGGCTTCCTATGGGACTTATCCTGGATATGGGGGCAACTATGCAAACCCGCAGTTGCCTACGTCAGTCCCACAAAATACTGCTGCATACGGAGCTTATCCTCCTGCATATCCTGTACAGCCTGCAGTTCCTCAACAGACTTACGTACAACCTGTCGCAGCTCCTACACAGCAACCCGCTGCAGTTCCTCAGGCCTATTATGGGAGTTACTATTGA 2604 0.4489 MPWSRTITIFSTDINQAPFIRFPTSKFHFSNFPQKPKKQGFNLLHCNEAVNLHFSMGDSETVVADASAAEAYAASASAGHADTVMDPVPEAGAATGEASQANSAYGYGEGNVYARDPNSGQLGGTGDSKQAAGVVDANEAGNAAAENSVVPEYNSTANGSVVTNAAGLENGNAVDNVDGSADEKQLADGYAAALSAEEDRLWNIVSANSLDFTAWTALIEETEKVAEDNILKIRRVYDAFLGEFPLCYGYWKKYADHEARLGAVDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAMIYTRILENPNQQLDRYFNSFKELAGSRPLSELRTADEAAAVTGVASEATDQPLEGEDRPDGAEISPKPVSAGLTEAEELEKYIAIREELYKKAKEFDSKIIGFETAIRRPYFHVRPLNIGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASANMDLANNVLARATQVFVKRQPEIHLFCARFKEQAGDIAGARAAYQLVHTETSPGLLEAIIKHGNMEYRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASENAEKAREILVGGLENVSLSKPLLEALLHFEAIQPQPKRVDMDFLESLVVKFIVPNPESPTVASAAEREELSSIFLEFLNLFGDVQSIKRGEDRHAKLFLPHRSMSELKKRSAEDFLASNKTKVSRTYSVQSPAQSVMGAYPNAPNQWTNYGAQPQTWPAVPQIQGQQWPAGYNQQASYGTYPGYGGNYANPQLPTSVPQNTAAYGAYPPAYPVQPAVPQQTYVQPVAAPTQQPAAVPQAYYGSYY* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0985 867 MobiDBLite consensus disorder prediction 384 410 - -
Lja1g0985 867 Gene3D Tetratricopeptide repeat domain 457 758 IPR011990 GO:0005515
Lja1g0985 867 SMART hat_new_1 622 654 IPR003107 GO:0006396
Lja1g0985 867 SMART hat_new_1 228 260 IPR003107 GO:0006396
Lja1g0985 867 SMART hat_new_1 581 616 IPR003107 GO:0006396
Lja1g0985 867 SMART hat_new_1 477 509 IPR003107 GO:0006396
Lja1g0985 867 SMART hat_new_1 262 294 IPR003107 GO:0006396
Lja1g0985 867 SMART hat_new_1 297 332 IPR003107 GO:0006396
Lja1g0985 867 MobiDBLite consensus disorder prediction 109 129 - -
Lja1g0985 867 ProSiteProfiles TPR repeat profile. 567 600 IPR019734 GO:0005515
Lja1g0985 867 SUPERFAMILY TPR-like 422 724 IPR011990 GO:0005515
Lja1g0985 867 Gene3D Tetratricopeptide repeat domain 203 369 IPR011990 GO:0005515
Lja1g0985 867 PANTHER PRE-MRNA-PROCESSING FACTOR 39 61 854 - -
Lja1g0985 867 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 61 854 - -
Lja1g0985 867 SUPERFAMILY TPR-like 205 365 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0985 Lja-Chr1 9794720 9803834 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0985 K13217 - gmx:100787373 1291.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0985 1 9794720 9803834 Lja1g0985 1 9794720 9803834 ECH