Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0982 ATGCTTCTAAGAAGCTCATCTACCCCAGTTCTTGGTTCTCTCCTACCTTCCTTCACAGAAAGTCCTAGTAATGTTCTTCACTCTGAATCATGTCACACACAGAAGCATCTTCCACCAACTAGTGTCCCTCAACATCAACACAGGCGTTCTTTCAGTCAAATTGGATCCTTTGGTCTTTCTCCATTCTCATGCAATTCTTCTCCAATATCTCCCTCCATTGCTGACCTTGACAGACAGAACAAAGGGTTCAGAAGAGTTCAGTCTGAAGGGAACTTAGAAGATTTGGTCTACAATTCTTGCAGTGAAGACAGGTTCAGTTACATAGACACTCCTAAGAGGTTTTCAGGGAGACAAAGGTGTTTGACACTGGAAACAATTCCATCTTTCACTCTTTCTAAGCACAGAGGATATCTGGAAGAAGATGAAGTTGAAAGTGACACTGAAGATGAGGCAGAGTATGAGGAAAAGGAAGGTGATGGTTTGAATTTCAGTGTGGTGAATAATGGCAGTGGTGTTATGTTGACCGAAGATTTGTTGGGAGTGAAGGATGGATTTTGCAGGGTGGGTTTTGGTGGCCAGGAAGAGGGTGTTGGTGGGGGAGAAATGTATCTTGCAAAGGGGCTTGGTGTTGGTAGCTTTGGTGATGGCATGGGTGGATGCAGAGGTGGTGGTGGTGGTGGAGGTGGTGATCATAGTTCCATGGGTTCTGGTGGGAATGATGGAGATATGCATGGGGTGGAAGAATATTATAAGAAAATGGTAGAGGAAAGTCCAGGGGATCCATTGTTTCTCAGGAATTATGCTCAGTTTTTGTATCAGTGCAAACATGACCTTAAAGGAGCAGAGGAGTACTATTCGCGAGCCATACTAGCAGACCCAAAAGATGGAGAAGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGCTACATCATGATGAAGAACGAGCCTCAAGCTATTTTGAAAGGGCAGCACAAGCCTCTCCTGAAGACAGCCATGTACATGCTGCATATGCAAGTTTCCTTTGGGACACAGAGGAAGGAGAAGATGGGTGCAATGAGTCTCAATGTTTACCATCACATTATCATCTTGGAGCTATAGCTAATTAG 1107 0.4435 MLLRSSSTPVLGSLLPSFTESPSNVLHSESCHTQKHLPPTSVPQHQHRRSFSQIGSFGLSPFSCNSSPISPSIADLDRQNKGFRRVQSEGNLEDLVYNSCSEDRFSYIDTPKRFSGRQRCLTLETIPSFTLSKHRGYLEEDEVESDTEDEAEYEEKEGDGLNFSVVNNGSGVMLTEDLLGVKDGFCRVGFGGQEEGVGGGEMYLAKGLGVGSFGDGMGGCRGGGGGGGGDHSSMGSGGNDGDMHGVEEYYKKMVEESPGDPLFLRNYAQFLYQCKHDLKGAEEYYSRAILADPKDGEVLSQYGKLVWELHHDEERASSYFERAAQASPEDSHVHAAYASFLWDTEEGEDGCNESQCLPSHYHLGAIAN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0982 368 MobiDBLite consensus disorder prediction 28 49 - -
Lja1g0982 368 PANTHER OSJNBA0004N05.2 PROTEIN 1 353 - -
Lja1g0982 368 SUPERFAMILY TPR-like 242 348 IPR011990 GO:0005515
Lja1g0982 368 Gene3D Tetratricopeptide repeat domain 238 351 IPR011990 GO:0005515
Lja1g0982 368 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 353 - -
Lja1g0982 368 SMART hat_new_1 311 343 IPR003107 GO:0006396
Lja1g0982 368 SMART hat_new_1 276 308 IPR003107 GO:0006396
Lja1g0982 368 SMART hat_new_1 241 273 IPR003107 GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0982 - - gmx:100788436 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0982 1 9750377 9752976 Lja1g0982 1 9750377 9752976 ECH