Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0971 ATGGACACAAAAGAAGAGGCCGAACCTAATGAGGAGAGGCCCTCGTCGCCGATGTGGGTTCTGCATCAGTTATCTGAGGGAGCATTCAGAGTTGCTGGGGAAGCATGGCAGAATATGTACTCCAGTGGTGGCGGCGGCGGTGATGGTGTTGGGTCAAGCATGCCACAAATGGGGCCTGGTGCTCATAGACGCTGTCAAAGTGAACTTGTTACTAAAGGATTTCAACGTAGTAGTAGCTTTCAGAAGTTGAAGTGTCACGTGCAAAAGGCCTGGCGGTGGAGTGGCAGATCCCGCGATGAAAATTCCCTGCCAAATTTTAATCCTGAGGTCATGGCAAATCAGAAACGTCAGTGGTATCAGCTTCATCCCAAATCTATGGATTCTGTAAATTATAAGGAGCCAACCTCGCTGTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGTCGTGGAGGATGCATTTGCAAGAAGGAAGAAGTGGGAAAAGGAAAGATGTGAATTTCCAGATTTGAAAATGTTGCAGCAACAGAAGCCAGCAGAACCAACTTTGGAACCTCAGATTTTGTTCAAATATCCACCTACAAAGAGGCTAACAGTGCGTATGAAGGATTTAGCCTCCTTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGCTGGAGAGGACTCCATCTTTCAGTGAACTAAACGAACTTGTCTATGGACAGGAGCATTTAGGAAGAGACGATCTATCATTTGTCTTCACACTCAAGGCAGTAGACAATACAACACTTTATGGAGTTTGCTTACATGTTCCTGAAATAGTTCAGAGGCCCCCTGGTATCTTAGGCATATCATCTCCTCATTCTCTGGTTTCCAGCCGTTTTATGGTTTCTGCACCTCGATGTTACTGTCTTCTAACTAGAGTTCCCTTCTTCGAGTTACACTTTGAGATGTTAAATAGTCTTATTGCACAGGAGCGTTTGAATCGGATAACTGAGTTTATAAATGAGATTTCTCTCACTAGTTGCCTTCCACCATCACCCAAACTGGATGATCAAATGAGTTCAAATGCTAACTCCCCAGATAGGCAGTCATTTAGTGACTGGATGTCTTGTGCAATTCCTCTTGATGGTGCAGCAGTCATTACTGCCGCTGCTGCTGGGCTTCTATCTGATGATGAAATCACACAGTTATCACCCAAAATATGGGATTCTCACTGTCAATCTCCTGCAAGTGTGGCTGCCAGCGATGCTTCTGATTTCTATCAGTTTAGAGACACAGATAAGGATGGCAGAAATAATCTGCAGGATCATAGTAATGATGATTTTGAGGCGCCAGAAATTCAGGAGACTATGGAAAGAGTGCATGGAAATTGTGAAGGTGGCCCAGTTTCTCCCATTGTTGGAACACCTCAATCTTCTAGGAGTCGTGTCTTGGAGCGTCTTGCAAGTTCTGAGTCTCTTTTCAGTCCAGTTAGAAGCATGGTATCTGAAGATGAGGATGATCCTTTTTCAAACAACGAAAGAGATTACGGAGATGATTACTTAATGGAATGGGCTATGGAGAATAAGAATGATTTGCTACAGATAGTGTGTCGATATCATGCTCAACCTATTCCACCTCGAGGGAGTGAGTTTGTTTTTCACCCTCTTGAACATCTACAAGCTATTCAGTATATACGACATTCTGTTGCTGCTCTTGGCTTTGAAGAAAATTGTTTTAATTGCTCTGAATCGGCTCAGGTCAATTCGAAGTTGGCAGCTGCTGAGGAAACCCTTGCATTATCAGTATGGACGACCGCAACTACGTGTCGAGTTCTGTCCCTTGATAGTGTGCTGGCATTAGTTACAGGAGTTTTGTTGGAGAAACAGGTGGTAATAGTGTGCCCAAATCTGGGTGTTCTGTCTGCCACAGTGCTTTCTCTTGTTCCCATGATTCGTCCATTTCAATGGCAGAGTTTACTGCTCCCGGTTTTACCTGGGAAAATGATTGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAGCATTTACCAGATGATTGGAATATGAAGACTTCCAATCTTGTTCATGTTAATGTACAGAAGAATCAGGTTAAAATGTGTCATTTGCCAAGACTTCCACAGTATAAAGAGCTTGTCTCTCAATTAGGACCAATTCATGCCAAACTTTCAAGGGAAAGTTCAATTGCTCAAAAGCATCCAATACATAGGTGCAACGAAGTACAGGCTGAAGCTGCAACTCAGTTTCTGAATATCATGTGGCATTATCTGGAGTCACTTTGTTCTGAACTGAAATTTCATACAATAACTAGTGTACAATCAAACAATGACAGGGTTTCTTTACTTCTTAAAGATAGCTTCATCGATTCCTTTCCTATTAGGGACCAACCATTCATTAAGCTATTTGTAGATACACAACTCTTCACTGTTTTATCAGACACTCGTCTATCAAGCTTTGAGAGTGGCGAGTCATAG 2475 0.4279 MDTKEEAEPNEERPSSPMWVLHQLSEGAFRVAGEAWQNMYSSGGGGGDGVGSSMPQMGPGAHRRCQSELVTKGFQRSSSFQKLKCHVQKAWRWSGRSRDENSLPNFNPEVMANQKRQWYQLHPKSMDSVNYKEPTSLFEHFVIVGLHPDANLEVVEDAFARRKKWEKERCEFPDLKMLQQQKPAEPTLEPQILFKYPPTKRLTVRMKDLASFCFPEGVKAWLLERTPSFSELNELVYGQEHLGRDDLSFVFTLKAVDNTTLYGVCLHVPEIVQRPPGILGISSPHSLVSSRFMVSAPRCYCLLTRVPFFELHFEMLNSLIAQERLNRITEFINEISLTSCLPPSPKLDDQMSSNANSPDRQSFSDWMSCAIPLDGAAVITAAAAGLLSDDEITQLSPKIWDSHCQSPASVAASDASDFYQFRDTDKDGRNNLQDHSNDDFEAPEIQETMERVHGNCEGGPVSPIVGTPQSSRSRVLERLASSESLFSPVRSMVSEDEDDPFSNNERDYGDDYLMEWAMENKNDLLQIVCRYHAQPIPPRGSEFVFHPLEHLQAIQYIRHSVAALGFEENCFNCSESAQVNSKLAAAEETLALSVWTTATTCRVLSLDSVLALVTGVLLEKQVVIVCPNLGVLSATVLSLVPMIRPFQWQSLLLPVLPGKMIDFLDAPVPYIVGIQHLPDDWNMKTSNLVHVNVQKNQVKMCHLPRLPQYKELVSQLGPIHAKLSRESSIAQKHPIHRCNEVQAEAATQFLNIMWHYLESLCSELKFHTITSVQSNNDRVSLLLKDSFIDSFPIRDQPFIKLFVDTQLFTVLSDTRLSSFESGES* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0971 824 PANTHER BNAA09G10210D PROTEIN 25 821 - -
Lja1g0971 824 Pfam uDENN domain 190 268 IPR005113 -
Lja1g0971 824 ProSiteProfiles Tripartite DENN domain profile. 172 822 IPR037516 -
Lja1g0971 824 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 25 821 - -
Lja1g0971 824 SMART uDENN_cls 134 269 IPR005113 -
Lja1g0971 824 SMART DENN_cls 295 696 IPR001194 -
Lja1g0971 824 Gene3D - 125 344 - -
Lja1g0971 824 Pfam DENN (AEX-3) domain 598 695 IPR001194 -
Lja1g0971 824 Gene3D - 593 758 IPR043153 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0971 Lja-Chr1 9617860 9625341 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0971 - - gmx:100814487 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0971 1 9617860 9625341 Lja1g0971 1 9617860 9625341 ECH