Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0968 ATGGCTTCTTCAGATTCCAATTCAAACCTTAGAATCTCCATTGAGAGAAACCCCTCCCAGTCACGCCTAGCTGAATTGAACATCAAGTGCTGGCCAAAATGGGGTTGCTCTCCAGGGAAATACCAGTTGAAATTTGATGCAGAGGAAACATGCTATTTGTTGAAAGGGAAGGTGAAAGCATACCCAAAAGGGTCATCAGAATTTGTGGAGTTTGGAGCTGGAGATCTTGTCACAATCCCAAAAGGACTCAGTTGCACTTGGGATGTATCTGTTGCAGTGGACAAGTACTACAAATTTGAATCATCATCATCTTCTTCATCATCACCATCCTGCTAA 336 0.4286 MASSDSNSNLRISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSSSPSC* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0968 111 Pfam EutQ-like cupin domain 24 97 IPR008579 -
Lja1g0968 111 Gene3D Jelly Rolls 2 99 IPR014710 -
Lja1g0968 111 CDD cupin_TM1112-like 31 99 - -
Lja1g0968 111 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 1 106 - -
Lja1g0968 111 PANTHER OS04G0445200 PROTEIN 1 106 - -
Lja1g0968 111 SUPERFAMILY RmlC-like cupins 21 97 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0968 Lja-Chr1 9595177 9595844 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0968 - - gmx:100793722 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0968 1 9595177 9595844 Lja1g0968 1 9595177 9595844 ECH