Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0959 ATGATGTCCAGTATGATCAGAGTCCTCCTAGTGGTGGTGGTGGCCACCATGGTGGTGGTTGCTCCTCCAAAAGCAACAGAAGCAGCAGCTCGTGCTTTCTTTGTGTTTGGAGACTCATTGGTTGATAGTGGCAACAACAATTACTTGGCAACTCCGGCACGTGCTGACGCTGCCCCTTATGGCATTGACTTTCCCTCTCATCTCCCCACTGGACGCTTCTCCAATGGCTTGAATTTTCCTGACATTATCTGCCAGAAAATTGGGTCTGAACCCCCACTGCCATACCTGAGCCCTGAATTTCAAGGACAAAACCTCTTGCTTGGTGCCAACTTTGCTTCTGCAGGGATTGGAATCCTCAATGACACTGGCATCCAATTTGTGGACATCATCAGAATGTTCCAACAATTTTCATTTTTTGAGGAGTACCAGCAAAGGTTAAGTGCACTTGTTGGGGCTGACGAAGCTCAGAACATTGTGAATGGAGCTCTTTACCTCATGACACTTGGTGGTAACGACTTTGTTAACAACTATTTCTTTCTTCCTGTCACTCCAAGGTCTCACGAGTTCACAGTCCCTCAGTTCTCTCAACTCCTTATCTCTGAGTACCAAAATATTCTCATGAGGTTGTATGAGTTGGGGGCTCGTCGAGTACTGGTGACAGGAACCGGTCCATTAGGTTGCATTCCGTCTCAGCTTGCCGCGAGAAGTAGTGACGGTGAGTGTGTGCCAGAGATACAGGAAGCTGCAGATATTTTCACCTCTATGTTGATCCAAATGACCAGAGATCTCAACTCTCAATTAGGCTCTGACATTTTTATTGCTGTCAATACCAACACAGTGCATGCAGAATTCGTCACCAATCCTCAAGCATATGGTTTTGAAACCTCAAAGATTGCATGTTGTGGTCAAGGTCCATACAATGGGCTAGGACCGTGCACCCCCTTGTCGCATGTTTGCCCTGACCGGGATGTCTATGCATTTTGGGATGCTTTCCATCCGAGCCAGCGTGCTTTGGAGTTCATTGCTGAGGGAGTGTTTAACGGATCTAGTGACATTATCAGCCCCATGAACCTCAGCACCATCATGGCCTTGGACTCCAAGATATAG 1107 0.4734 MMSSMIRVLLVVVVATMVVVAPPKATEAAARAFFVFGDSLVDSGNNNYLATPARADAAPYGIDFPSHLPTGRFSNGLNFPDIICQKIGSEPPLPYLSPEFQGQNLLLGANFASAGIGILNDTGIQFVDIIRMFQQFSFFEEYQQRLSALVGADEAQNIVNGALYLMTLGGNDFVNNYFFLPVTPRSHEFTVPQFSQLLISEYQNILMRLYELGARRVLVTGTGPLGCIPSQLAARSSDGECVPEIQEAADIFTSMLIQMTRDLNSQLGSDIFIAVNTNTVHAEFVTNPQAYGFETSKIACCGQGPYNGLGPCTPLSHVCPDRDVYAFWDAFHPSQRALEFIAEGVFNGSSDIISPMNLSTIMALDSKI* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0959 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 365 - -
Lja1g0959 368 Gene3D SGNH hydrolase 23 350 IPR036514 -
Lja1g0959 368 CDD SGNH_plant_lipase_like 32 349 IPR035669 -
Lja1g0959 368 SUPERFAMILY SGNH hydrolase 33 347 - -
Lja1g0959 368 Pfam GDSL-like Lipase/Acylhydrolase 34 343 IPR001087 GO:0016788
Lja1g0959 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 5 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0959 Lja-Chr1 9465579 9468099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0959 32 362 Acyl Lipid Metabolism Gene Families AT4G10950 33.628 3.65e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0959 - - aprc:113860789 533.487