Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0958 ATGGCGGAGCCTCCTCCTTCTCTGACCTCTCTCTGCATCGACGCCATCACTCAAGAACTCATCGCCGGAGATGACGCTCTTCTTCTTCTTCAAACTATATACGACTTTCCATTACATTTGCTTGATACCCTAATCACACGTTTGCCCCCTTTGGCTTTGCACAAATTCCACCACCACCTACCATTTCAGGACGAGGATGAGGAGGGTTTTTTGCGCGAAGACTCGACAAAGAAGAGAAAACGTGCAAGGGATTGGAATCTAAATGCAGCTTGGCGGAACTTGTTTAAGTTACGATGGCCTGATCTCATTAATCAAATCCAACCAACTGATTGGCAACAAGCTTACTGGGAAACCCATTTGCAAAATTGTCTGGATGAAGCAGCAGAGATAGCCCTAATCCCATCTTTTAATGGATCTATTGGTGACATACAGATTTCAGATAGCACACTGAAATATATTGGATTTGTGGAATATACAAATCATTCAACTTGTGACCATTCAAAACTGTCTTATCACTGCCTACAATTTGGCAGCCATGTGAGTTGTCTGAGACTGCAAAACGTACTATTTACAGCCGAAATTAGTGGTCTGTTGAGGGAATGCAAGCTGCAGAGTCTGGTGCTAAGATGGATCAGATACAAGGAACAAGTTGATGAAGTATGCAAACTTCTCACTCAACATAGTGGAACATTAACATCGCTGGAATTTGTTCACTGTTATGTCGACACAGATTTTATTAATGCAATATTTGGTTCTCTAGTCATAAAGGGTGTACAAAAACATGGGATTCAACACTTATCAATCATCGCTTCAAGTTTTTTGGAACCATGCACAGTTTCTTTACCTAATGGGTTTGAGTCATTTTTGTCTTCAGGAAGGTCCCTGTGCTCAATAAGACTCTCTGACAACCACCATGGACGGACTTTTGCCAAAGCACTTTTTATGACTCTTCTCAATCTTTCCTCTACAATATCTGTCCTTGACCTTTCTGAGAATAGAATAGCAGGATGGCTTTCTGACTTTAACAGGAGACTCTCAAGTGGTTCACATGCATGTGTTGAAATTGGAAAGTCCTTGCAACAGTTGCGTGTACTCAACCTAAGGGGAAACAATTTACGGAAAGATGATGCAGAAAGTCTTAGGTATGCTCTTGCACACATGCCTAACTTGGAGGACCTGGATATAAGTGACAATTTAATTGAGGATGAAGGAATCAGGAATTTAATTCCCTCTTTTTTGGGAACATCTGAAACGGGTTCTCGCATTTCTTGCTTGAAAGTAGAGAATTGTGAGCTGTCCTGTGATGGTGTGAATCATCTACTTTATGCCCTTTCTACCTCCAAAGCACCCTTGAAGACTCTTTCTGTTGCTGACAACTACCTTGGCAGTCAAGTAGCTATAGCATTGGGAAAATTTTTGAGCACACCTATCGAACTACTTGACATTGGAGGCATTGGATTGGGTTCATTTGGTTTTCGAGATCTTCGAAATCTAATAAAGGAGCAGCTTAAGCTGGTGAAAATCAATATTAGCGAAAACCGCGGCGGGATTGAAACTGCTGAGTTTCTGTCAAAACTCTTGTCTCAGGCTCCACAACTAATTGAAGTGAATGCAGCAAGTAATCTTATGCCTATAGACTCACTGTCCATCATCTGCTCTGCATTAAAAATTGCAAAAGGTAATGTTCAGCATTTGGACTTGACGGGACATACATGGGACTATAAGCCAGAGCATGCTTCCCTACACGCTGAATTTGTACATGATGGAAAGCCTATATTGATTCTTCCATCACCATCAGCCGTTGCTGCTCCTCATGACCATGATCCTTAA 1830 0.4164 MAEPPPSLTSLCIDAITQELIAGDDALLLLQTIYDFPLHLLDTLITRLPPLALHKFHHHLPFQDEDEEGFLREDSTKKRKRARDWNLNAAWRNLFKLRWPDLINQIQPTDWQQAYWETHLQNCLDEAAEIALIPSFNGSIGDIQISDSTLKYIGFVEYTNHSTCDHSKLSYHCLQFGSHVSCLRLQNVLFTAEISGLLRECKLQSLVLRWIRYKEQVDEVCKLLTQHSGTLTSLEFVHCYVDTDFINAIFGSLVIKGVQKHGIQHLSIIASSFLEPCTVSLPNGFESFLSSGRSLCSIRLSDNHHGRTFAKALFMTLLNLSSTISVLDLSENRIAGWLSDFNRRLSSGSHACVEIGKSLQQLRVLNLRGNNLRKDDAESLRYALAHMPNLEDLDISDNLIEDEGIRNLIPSFLGTSETGSRISCLKVENCELSCDGVNHLLYALSTSKAPLKTLSVADNYLGSQVAIALGKFLSTPIELLDIGGIGLGSFGFRDLRNLIKEQLKLVKINISENRGGIETAEFLSKLLSQAPQLIEVNAASNLMPIDSLSIICSALKIAKGNVQHLDLTGHTWDYKPEHASLHAEFVHDGKPILILPSPSAVAAPHDHDP* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0958 609 Gene3D Ribonuclease Inhibitor 139 341 IPR032675 -
Lja1g0958 609 SUPERFAMILY RNI-like 162 575 - -
Lja1g0958 609 Pfam Leucine Rich repeat 386 407 IPR001611 GO:0005515
Lja1g0958 609 Pfam Leucine Rich repeat 362 380 IPR001611 GO:0005515
Lja1g0958 609 SMART LRR_RI_2 448 475 - -
Lja1g0958 609 SMART LRR_RI_2 419 446 - -
Lja1g0958 609 SMART LRR_RI_2 502 529 - -
Lja1g0958 609 SMART LRR_RI_2 359 386 - -
Lja1g0958 609 SMART LRR_RI_2 387 414 - -
Lja1g0958 609 Gene3D Ribonuclease Inhibitor 342 583 IPR032675 -
Lja1g0958 609 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 3 609 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0958 - - lja:Lj1g3v4538830.2 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0958 1 9457820 9464584 Lja1g0958 1 9457820 9464584 ECH