Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0936 ATGGCGTCAGTGATTCCTCGTGACGAAGAGGCGCCACTGGTCGCCGCCGCCGATGACTCGCCGGCTCTTCAATCACCGAAGAGCCACCACACGAAGGACGTTCATATCTTGAGCTTGGCTTTTCTCTTAATCTTCCTTGCCTATGGAGCAGCACAGAATTTACAGAGCACTCTCAACACCGAGGAGGATTTGGGTACAACTTCACTTGGGATATTGTATCTGTCTTTCACGTTTTTCTCAGTGGTTGCTTCTTTGGTGGTGCGGAAACTCGGTTCCAAAAACTCTTTGATTATTGGGACTACTGGTTATATATTGTATGTGGCTGCAAATTTGAAGCCCAATTGGTATACACTGGTTCCGGCCTCTTTGTATCTTGGGTTTTGTGCTTCTATAATATGGGTTGGAGAGGGAACATATCTCACTTCCACCGCACGCAGTCATGCTACTGATAACAAATTGCATGAAGGTGCAGTAATTGGTGACTTTAATGGGGAATTCTGGGCTGTGTTTGCCCTCCACCAGTTTATTGGGAATCTTATTACATTTGCTCTACTGAGTGATGGGAAGGAGGGAAGTACCAATGGTGCAACTTTGTTGTTTGTTGTATTCCTTTGTGTTATGGCCTTTGGCGCAATACTAATGTGTTTCTTGCGTAAACTGAGTGAGAATAGCAAGAGAGAATATGACCATTCAGGTGCTGGTGCTAGTGAACATTCGTCCCTCAAGTCTCTATGTAGGTCACTTACCAGTGCATTATCTGATGTAAAGATGTTGTTGATCATACCCCTTATGGCATATTCAGGCCTACAACAAGCATTTGTATGGGCTGAGTTTACCAAATATGTTGTAACTCCTGTAATTGGTGTTTCTGGTGTGGGTAGTTCAATGGCAGCATACGGGGCTTTTGATGGAATTTGTTCTCTTGCTGCTGGTCGTCTCACCTCTGGTCTCACGTCTATTACAGCAATAGTTTCTTTTGGAGCTTTTATTCAGGCAGTTGTATTCATCTTGCTTTTGCTAGATTTCAGCATAAGTAGCGGATTCCTTAGCACTCTATATATACTCTTCTTGGCTGCTTTATTGGGCATTGGTGATGGAGTTCTTATGACGCAGCTCAATGCTTTGCTTGGAATGCTATTTAAGCATGACACGGAAGGGGCTTTTGCACAGCTAAAGATATGGCAGAGTGCTACAATTGCTATCATGTTCTTTTTGTCCCCCCACATATCGTTTGAGGTAATGGTGGTGATTATTCTGGCTTTCCTTTGCTTCTCATTCTGCAGCTTTCTATGGTTAGCTCTCAAGGTGGTTAAGACATCATCATCCTCCACCAGCGAGTGA 1341 0.44 MASVIPRDEEAPLVAAADDSPALQSPKSHHTKDVHILSLAFLLIFLAYGAAQNLQSTLNTEEDLGTTSLGILYLSFTFFSVVASLVVRKLGSKNSLIIGTTGYILYVAANLKPNWYTLVPASLYLGFCASIIWVGEGTYLTSTARSHATDNKLHEGAVIGDFNGEFWAVFALHQFIGNLITFALLSDGKEGSTNGATLLFVVFLCVMAFGAILMCFLRKLSENSKREYDHSGAGASEHSSLKSLCRSLTSALSDVKMLLIIPLMAYSGLQQAFVWAEFTKYVVTPVIGVSGVGSSMAAYGAFDGICSLAAGRLTSGLTSITAIVSFGAFIQAVVFILLLLDFSISSGFLSTLYILFLAALLGIGDGVLMTQLNALLGMLFKHDTEGAFAQLKIWQSATIAIMFFLSPHISFEVMVVIILAFLCFSFCSFLWLALKVVKTSSSSTSE* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0936 446 Pfam Ion channel regulatory protein UNC-93 64 430 IPR010291 -
Lja1g0936 446 PANTHER - 9 441 IPR044771 GO:0055075
Lja1g0936 446 Gene3D MFS general substrate transporter like domains 29 232 IPR036259 -
Lja1g0936 446 CDD MFS_unc93_like 34 430 IPR044771 GO:0055075
Lja1g0936 446 PANTHER UNC-93 RELATED 9 441 - -
Lja1g0936 446 SUPERFAMILY MFS general substrate transporter 31 434 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0936 Lja-Chr1 9228415 9231413 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0936 - - lja:Lj1g3v4551290.1 709.138